Oncorhynchus nerka (sockeye salmon): 115139486
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Entry
115139486 CDS
T07952
Name
(RefSeq) katanin p60 ATPase-containing subunit A1 isoform X1
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115139486
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
115139486
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
115139486
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
KATNA1_MIT
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
AAA_14
AAA_33
TIP49
DUF8168_C
NPHP3_N
AAA_16
nSTAND3
Mg_chelatase
AAA_2
AAA_7
AAA_22
IstB_IS21
DUF8697
AAA_28
RNA_helicase
AAA_RNF213_4
TsaE
ABC_tran
PhoH
SRPRB
AAA_24
SLFN-g3_helicase
AAA_18
AAA_17
MIT_ATG38
BBS1
TPR_1
AAA_30
Motif
Other DBs
NCBI-GeneID:
115139486
NCBI-ProteinID:
XP_029532807
LinkDB
All DBs
Position
LG13:17888269..17894753
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AA seq
488 aa
AA seq
DB search
MSLHEINENVKLAREYALLGNYSSAIVCYRGVLEQIKKYLFTVRDSSFQQKWQQVWQEIN
EENNQVQEIMTTLESFQLETTPSKPPSNQDDINDIWPVQVERRASPLPVRRPPVPYKDSK
PHNNRLSVAGVRAQHRQSPRGANGDRAKPLKGKEKKEPPAKPKDDKNKAEVSEKEVKRFD
GQGYDKDLIEALERDIISQNPNVKWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWK
GVLMVGPPGTGKTLLAKAVATECRTTFFNVSSSTLTSKYRGESEKLVRILFEMARFYAPT
TIFIDEIDSICSRRGTSEEHEASRRVKAELLVQMDGVGGASDNEDPSKMVMVLAATNFPW
DIDEALRRRLEKRIYIPLPSAKGRVELLRINLKELELANDVDMAKIAEQSEGYSGADITN
VCRDASLMAMRRRIEGLTPEEIRNISRAEMHMPTTMEDFESSLKKVSKSVSASDLEKYEK
WIEEFGSC
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgagtctgcatgagatcaatgaaaacgtgaaacttgctcgagagtacgctttgcttggg
aactacagttctgctattgtttgttatcggggagtacttgaacaaatcaagaaatacctt
ttcacagtacgggacagtagcttccaacagaaatggcaacaggtatggcaagagataaac
gaagaaaacaatcaggttcaagaaataatgacaactctagaaagttttcaactggagacc
accccatccaaaccaccaagtaatcaagatgacattaatgacatatggcctgtacaagta
gagcgcagagcctctcctcttccggttaggaggcccccggttccctacaaagacagtaaa
ccacacaacaaccgcctgagtgtggccggtgtgcgggctcagcatcgccagtcaccacgt
ggggccaatggggaccgagccaaacctttgaagggcaaggaaaaaaaagagcccccagcc
aaaccaaaagacgacaagaacaaagctgaagtctcagagaaagaggtgaagcggtttgac
ggacaaggatatgacaaagaccttattgaggccctggagagagacatcatttcacagaac
cccaatgtcaaatgggatgatattgcagacttggaagaagcaaaaaagcttttgaaagaa
gctgttgtgctacctatgtggatgccagagtttttcaaaggaatacgaagaccatggaag
ggtgtgcttatggtgggtcctccaggcacaggaaagactcttctggccaaagccgttgcc
acagagtgcagaaccacattctttaacgtctcgtcttctactctcacttccaagtacaga
ggagagtctgaaaaactagtccgcattctatttgaaatggccaggttctatgcccccacc
accatattcattgatgagattgactccatatgcagccgcagaggaacgtcagaggaacat
gaggctagccggcgggtgaaggcagagctgctggtccagatggatggtgtggggggagca
tcagataatgaggatccctctaagatggtgatggtgctggcagccactaactttccctgg
gacatcgatgaggctctgaggagacgtctggagaagagaatctacatccctctgccttca
gccaagggcagagtggagctgctgaggatcaacctaaaggagctggagctggccaatgat
gtggatatggcaaagatagcagagcagagtgagggctactcaggagcagacatcaccaat
gtgtgcagggacgcctctctgatggccatgcggcgaaggatcgaggggctgacgccagag
gagatccgtaacatttccagagccgagatgcacatgcccaccaccatggaggactttgag
tcttctctgaagaaagtgtccaagtctgtatcggcgtccgatctagagaagtatgagaag
tggattgaagagtttggctcctgctga
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