Oncorhynchus nerka (sockeye salmon): 115139563
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Entry
115139563 CDS
T07952
Name
(RefSeq) PR domain zinc finger protein 1-like
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139563
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115139563
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GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2H2_jaz
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-met
Zap1_zf1
B129_C2H2-zf
Zf-C2H2_ZNF451
zf-BED
Motif
Other DBs
NCBI-GeneID:
115139563
NCBI-ProteinID:
XP_029532954
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All DBs
Position
LG13:25535951..25553466
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AA seq
780 aa
AA seq
DB search
MCGSSQGFTAVSSSQNSTAMLTSDGSPFPHTTSVSTLTLTLTDSNLQDIDMTLWSEAEFQ
ERCTYILKDHPLHPGNHPENQTEAERSLPRNLVLKRCPDSAEVLGVTSRELIQKGTRFGP
LVGQTYSNDMVPKDANRKYFWRVFSEGRLHHILDGLDEEKSNWMRYVNPARRPEDQNLAA
CQTGMAIYFYTVRAVPPGQELLVWYCPEFAHRLNYPPPGELFTERIEQNNVRGKSSGKTR
HSMSEILRMEHNKPDPTCPRLPESALSSTCSPVLPLCPSVVYSSYPPIPYCGPPIPKRSL
SSRVSPHMHFPVKPSLGIPITAQHYTVSSLPGRMYPSSLCSPYLIPHFPLGINSLLPHTY
SDRIAPHLPFPPHMLPFEVYPHVLRPSANVHKELLLALTTTPKKLSLPNGSRDLPLAQTK
SKKDLNCMPTNGCKHLGDHVPSPKNYLKNLPLTPTDNFSDPNHSSASSTFDDQPLPATSS
KANCLAPRGGSLLVGLTASSDYLPSKRTSALLSSSHSAEEGAVDLRKARHGGRVIGYKTL
SYPLTRKNGKIRYECNICSKLFGQLSNLKVHLRVHSGERPFRCQTCSKDFTQLAHLQKHF
LVHTGEKPHECQVCRKRFSSTSNLKTHLRLHSGEKPYQCKLCLARFTQYAHLKLHKRLHT
GERPYHCPHCLCAYLNYCSLQVHLQGFCPSGPDPSGPVPSVEELHRVNAAIEQFDLSKAA
ERLEAMAAGAEAEKGNSSTSVLLQEMELGRKSSNHFNGANGNMSLVEHGLLCSSEGILCP
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgtgtggctcctctcaaggcttcacagccgtctcttcctcccagaacagcacagccatg
ttaacctcagatggctccccctttccccacaccacatcggtctccaccctgaccctgacc
ctgaccgactcaaacctccaggacatagacatgaccctctggagtgaggccgagttccag
gagaggtgcacctacatcttgaaggaccacccgttgcacccgggtaaccacccagagaac
cagaccgaggctgagaggtctctaccccgaaacttggtcctaaaacgctgccctgactct
gcagaggtgcttggggtgaccagtcgggagctcattcagaagggtacacggttcggtcct
ctggtgggccagacctacagcaatgacatggtgcccaaagatgccaacaggaagtacttc
tggagagtattctcagagggtcggttacatcacatcctggatggcttggacgaggagaag
agcaactggatgcgctacgtcaacccggcccgtcgtccagaggaccagaacctggcggcg
tgccagactggcatggccatctacttctacacggtgagagccgtgccaccgggccaggag
ctgctggtgtggtactgcccggagttcgcccaccgtctcaactacccgccacccggagag
ctcttcacggagagaattgagcaaaacaatgttcgtggaaagagttcagggaagacgagg
cacagcatgtctgaaatcctgaggatggagcacaacaagcccgaccccacttgcccccga
ctccccgaatcggcactgtcctcaacctgcagccctgtcctacccctgtgcccctctgtg
gtctactccagctacccacccatcccgtactgtggccccccaatccccaaaaggtccctc
agcagccgtgtcagcccccacatgcacttccctgtcaagcccagcctgggcatccccatc
acagcccaacattacacagtgtcgtcattgccaggtcgcatgtaccccagttcactgtgc
agtccctacctcatacctcacttcccgcttggcattaacagcctactacctcacacatac
agtgacagaatagctcctcatttgccatttccacctcacatgctgccttttgaggtgtac
ccgcacgttctgcgcccatctgccaatgtacacaaagagctcctgcttgcactgaccact
accccaaaaaaactctcactgcccaatggcagcagagatctgcccctcgcacagaccaaa
agcaaaaaagacctcaattgtatgccgaccaatgggtgcaaacaccttggggaccatgtg
ccttcaccaaagaattacctcaaaaacctacctttgacaccaacggacaacttcagtgac
cccaatcattcatctgccagcagcaccttcgatgaccagcctctaccagccacctcttca
aaggcaaactgcctcgcacccaggggaggctcactgctggtgggcctgaccgcctcttct
gactacctcccctccaagcgcacatccgccctcctgagctccagccacagtgcagaggaa
ggggcagtggacctgcggaaggccaggcatggtggacgggtcatcgggtacaagaccctg
tcctacccgctcacacggaagaatgggaagatccggtacgagtgcaacatctgcagcaag
ctcttcggtcagctatccaacctcaaggtccacctgcgcgtccacagtggagagcggccc
ttcaggtgtcagacctgcagtaaggacttcacccagctggcccacctgcagaaacacttc
ctggttcacactggggagaagccacacgaatgccaggtgtgccgcaagcgttttagcagc
accagcaacctcaagacccacctgcgtctccactcaggtgagaagccctatcagtgtaag
ctgtgcttggcccgcttcacccagtatgcccacctcaagctccacaagcgcctgcacact
ggcgagcgcccctaccactgcccacactgcctatgcgcctacctcaattactgcagcctc
caggtgcacctccagggtttctgcccctcaggacccgacccctcaggccctgttccctct
gttgaggagctgcaccgtgtcaatgccgcgattgagcagttcgacctgagcaaggctgcg
gaacgcctggaggcaatggcagcgggagctgaggcggagaaggggaacagcagcactagc
gtcctgctgcaggagatggagttggggcggaagagctccaaccattttaacggcgccaat
gggaatatgtcactagtcgagcatggcctactatgcagcagcgagggaatcctctgtcct
tag
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