Oncorhynchus nerka (sockeye salmon): 115139579
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Entry
115139579 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: protein sel-1 homolog 1-like
KO
K14026
SEL1 protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115139579
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Motif
Pfam:
Sel1
fn2
Motif
Other DBs
NCBI-GeneID:
115139579
NCBI-ProteinID:
XP_029532987
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Position
LG13:27099685..27155948
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AA seq
802 aa
AA seq
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MDFKGSFKTSRMVLSLVVLLVFFSHGTAADEELQGNHDHAPELKSYHDPNSEEEEDPVGS
RIVAGMVTSAREAPQREGERRPDGGVQEGGEEKEDLPTQPPPIEERPKEIPVVNGGTANR
EPCLFPFLFLGKEYSDCTTDGRGDERLWCATTYDYDRDKRWGFCETEEQAEQRHVVEEAE
KEYQTALRMINGTNRKSQKKELYEKLLKVAWKGHHKAMEKVAYAMLFGDYMTQNIPKAKE
LFEKLSLEGSPKAQMALGFLYAAGLGVNSSQAKALVYYTFGALGGNLVAHMILGYRYWGG
VGVPQSCESALTHYRLVANHVASDVSLTGGSAVQRVRLLDEVENPGSTSGMLEEDLIQYY
QFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAYDYFNQAANAGNTHAMAFLGKMYSDGS
EYLSQNNETALQYFKKASDLGNPVGQSGLGMAYLYGRGVPVNYELALKYFQKAAEQGWVD
GQLQLGTMYYNGIGVKRDYKQALKFFNLASQAGHILAFYNLAQMHATGTGVMRSCHTAVE
LFKNVCERGRWSERLMAAYRSFKDGDMDGSLVQYLLLAEQGYEVAQSNVAFILDQTEARI
FSENETYPRALLHWTRAAAQGYTVARIKLGDYHFYGYGTDVDYETAVIHYRLASEQQHSA
QAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPDAQVPVFLALCKLGLVYTLQYMHDL
NMTELVSQVDLDQLLGPEWDLYLMTVIALLLGTVIAYRQRQHQAVPPRPPPLPAPARPPQ
EQPQPEDQVQPEVPPQAEEEQQ
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggattttaaagggtcattcaagacttcgaggatggttttgtccctggttgttctcctt
gtatttttctcacacggaacagcagctgatgaagagctacaggggaatcatgatcatgct
cctgaattgaagtcttaccatgaccccaactctgaggaggaagaggacccagtaggttcc
aggattgtagcaggaatggtgacttccgccagggaggccccgcagcgtgagggggagaga
agacctgatggtggggtccaggagggtggggaagagaaggaggacttgcccacccaacct
cctcccattgaggaaaggcccaaagagattcctgtggtgaatgggggcacagccaatagg
gagccctgtctgttcccctttctcttcctggggaaggagtactcggactgtaccactgat
ggacggggggacgaacgcctgtggtgcgccacaacctacgactacgacagggacaagaga
tggggtttctgtgagacggaggagcaggctgagcagaggcatgtagtggaggaggccgaa
aaggagtaccagactgccctccgcatgatcaacggaaccaaccggaagagccagaagaaa
gagttgtatgagaagctattgaaggtggcctggaaaggccaccacaaggccatggagaag
gtggcctacgccatgctgtttggagactatatgacccagaacatccccaaggccaaggag
ctgtttgaaaagctgtccctggagggctcccccaaagctcagatggcacttggtttcttg
tacgctgctgggttaggagtgaactccagtcaagcaaaggcactggtttactacaccttc
ggggctttgggtggaaacctggtggctcatatgattctgggataccgatactggggtggt
gtgggtgtgccccagagctgtgaatcagcactgacgcactacagactggtggccaatcat
gtggccagtgacgtgtccctgacgggaggcagtgcggtgcagagggtacgtctgctggac
gaggtggagaacccaggctctaccagcggcatgctggaggaagacctgatccagtactac
cagttcctggctgagaagggagatgtccaggcccaggtgggactgggccagctgcatctg
cacggtggtcggggggtggagcagaaccaccagcgggcgtatgattacttcaaccaggca
gcgaatgcggggaacacacacgccatggccttccttgggaagatgtactcggatggcagt
gagtacttgtctcagaacaatgagacggcactgcagtacttcaagaaggcctctgacctg
ggtaaccctgttgggcagagtggactgggcatggcgtacctgtatgggaggggcgttcca
gtgaattacgagttggcgctgaaatacttccagaaggcagcagagcagggctgggtagac
ggacagcttcagctgggcacaatgtactacaatgggatcggggtgaagcgtgactacaag
caggccctcaagttcttcaatctggcctcgcaggcgggccacatcctggccttctacaac
ctggcccagatgcatgccacgggcaccggcgttatgcgctcctgccacaccgccgtggag
ctcttcaagaatgtgtgtgagcgtgggcgctggtcagagaggcttatggcagcctaccgc
agctttaaggacggcgacatggatgggtcgctggtgcagtacctactgctggccgagcag
ggctatgaagtggcccagagcaatgtagccttcatcctggaccagacagaggcccggatc
ttcagtgagaacgagacgtaccctcgagccctcctccattggaccagagcagcagcacag
ggttatactgtggctagaataaagcttggggactaccatttctacggttatggtactgat
gtggactacgagactgctgtcatccactataggctggcctcggagcagcagcacagtgct
caggccatgttcaacttgggctacatgcatgagaaaggcctgggcatcaaacaggatatc
cacctggccaagcgtttctatgacatggctgccgaggccagtcccgacgcccaggtgccc
gtcttcctggctctgtgtaaactgggcctggtctacaccctgcagtacatgcacgacctc
aacatgactgagctggtcagtcaggtggaccttgaccagctcctgggccccgagtgggac
ctctacctcatgacggtcatcgccctgcttctgggcactgtcatcgcataccgccagaga
cagcatcaggctgtgcccccgcggccccctcctctcccggccccagccaggcccccccag
gagcagccccaacctgaggaccaggttcagcccgaggtcccaccccaggccgaagaggag
cagcagtga
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