Oncorhynchus nerka (sockeye salmon): 115139610
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Entry
115139610 CDS
T07952
Name
(RefSeq) interphotoreceptor matrix proteoglycan 2-like isoform X1
KO
K19017
interphotoreceptor matrix proteoglycan 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115139610
Glycosaminoglycan binding proteins [BR:
one00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
115139610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEA
Motif
Other DBs
NCBI-GeneID:
115139610
NCBI-ProteinID:
XP_029533043
LinkDB
All DBs
Position
LG13:28323906..28356658
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AA seq
2176 aa
AA seq
DB search
MPWKCGLIITLFLVLFTLHATAIKERNNRGSLQRGVIGTETEAINSMHLVELLKTTKQNS
NVRTIFDLEKHRRKRAAVFHSGVRVCPQETINEVIASHQAYYRLRVCQEAVWEAFRIFFD
RIPVTTEYTTWVHTCQHESLCLADLATNFSNSEEHMSMVYRRMNLRDERQSTGAEAAATT
AAPEVTGIAGPEETRTAAPEPPTPVTSDSSVPDAPDDTVEEETAAEEDSELPNIIPENHV
EEIVEFSIDLVDPGYRELLDDPDSPQYVDLSQHLQDQMLHVFDKLPGFKEISVLGISEAH
GSEGPGGVTVHYSLVFQTISEDDTGTPGSTVPSLREMVAKALSEEASLPVDLQSLNFEPV
KGIPPTTTPVEEAVEETIEDSIEPAFHNDLDISTDEPEIAMEKPRLDVPLGPVEKENALI
TFLDSTDIPEKQEEAAPPERGDVPYIYKDTSDELVESESEATTEPEEEVPFITHMIETIQ
AIDEGTGELVRDYFPTSPAEEYPEPPFGNLVPTNGYPVLPHVDLDITSAHEIKSIETNAP
AKLLPNLISEEEAVVEKEAEPTPTTQIKLTTVIATEEEVSNPELPVTTLSAITDQPATEA
IEDFEVEDDIIHIPIEGEEVEEPEPEEEVVGISEPEKAIVVEPEPEEEVFEEPEPNEDVV
EDPEPEADVDEVMVVKILEPEEEGVEVSEPEEEVVKAPEPEEEVVEEPEEEVVEEPEEEV
VEEPEEEVVEEPEEEVVEEPEEEVVEEPEEEVVELLEPEEEVVEELEPEEEVVEELEREE
EVVEVSEPEKEVVVEPETEEEAFEGPEPEEEVTEEPELEEEVVEEPEPKEDAVEEPEPEV
EVDEVFVVEVLEPEEEVVENLEPEEDVAEELEPGERVDEVSEPGERVDEVSEPDEEVGEV
LEPEEEVVENLEPEEEVAEELEPGEKVDEVSEPDEEVGEVLEPEEEVVENLEPEEEVAEE
LEPGEKVDEVSEPDEEVGEVLEPEEEVVENLEPEEEVAEELEPGEKVDGVSEPDEEVGEV
LEPEEEVVDEPEPVEGVVELSEPEKEVLEELQTEEEVVEVLEHEKEVLEEIEPEEDVVEE
PEEEVVELLEPEEDVVEELKPEEAVVEEPKPEEMVVEEPEPEENVIEVSEHEEKVVEKTE
EVFEELEPEEAVVEELEPEEEVVEELEPDEEVVKEPEPEVEVVEEPDPEDEVVAKPEHEE
EVIEESEPEEDIVEEPEPEEEVVDELKPEEEVVEEPVVEELEPAEEVVEELEPEEEVVEE
PEPEEEVVEVSEPKEMVVEKPEEAVVEEPEPEEEVVEEPETEEEVIEVLEHEEKVVDEPE
VDVVEEPAYEEEIIEDSEPEEDIVEEPEPEEAVVEELEPAEEVVEELEPEEEVVEEPEPE
EEVVEVSEPKEMVVEKPEEAVVEEPEPEEEVVEEPEFEVVEEPAYEEEVIEESEPEEDIV
EEPEPEEAVVEELEPAEEVVEELEPEEEVVEVSEPKEMVVEKPEEAVVEEPEPEEEVVEE
PETEEEVIEVLEHEEKVVDEPEVEVVEEPAYEEEVIEESEPEEDIVEEPEPEEAVVEELE
PEEEVVEELEPEEAVVEELEPEKAVVEELEPKEVVVEELEPKEEVVEELEPEEEVVEGPE
PEEEVVEEPKPEEEVVEEPEPEDAVVEEPEYEEEVIEETEPEEEVVEVLEPEEEEVEEPM
PEEEEVQEPEPEEEVVEDPGPKEEVVEVSEPEEEEVEEPMPKEEEVEEPEPEEEEVEDPE
PAEGVVEETQLEENISEPPAEEIKIIQPVDSLEDTLFGEETWKPDPVEEDNIVPIEDQST
EEDKEELLPEYHGYEDSYPEKAVDTVEETDDTAEVSEVEVAPLPEESEEKIAMIAEPIPD
STSTPPAESDTVPVVDVTESPSELELMVEDTEEPEVVVIDEEAEEEVVEDSEPEDERVQD
LADELDQMDLVSTEPVNLPEASGYSLAPEEHPVETTASPPLRYLTTPSMTTASKGRELVV
FFSLRVTNMRFSDDLFNKSSSEYRSLENTFLELLLPYLQSNLTGFKKLEILNFRNGSIVV
NSKMKFTKSVPYNVTQAVHCVLEDFCNAAAMRLNIEIDSHSLDIEPADQADPCKFLACND
FSHCVVNRWSREAECLCDPGYMAMDGLPCQSICVLQPDYCQNGGRCEIVPRHGATCRYPE
MYTSSRPDKLRTSSVE
NT seq
6531 nt
NT seq
+upstream
nt +downstream
nt
atgccttggaaatgtggactcattattacgctgttcctggtcctcttcactctccacgcc
actgcaattaaagagaggaataatcggggctctttgcagagaggagtaatcgggacagaa
acagaagccatcaattctatgcacttggttgaacttctgaaaacgaccaagcaaaactcg
aatgtcagaacgatatttgacctggaaaagcatcggaggaagcgggccgcagtctttcac
tctggagtgagagtctgtcctcaggagaccatcaatgaggtcattgccagccatcaagcc
tactacaggctcagagtttgtcaggaggctgtgtgggaggccttccggatcttctttgac
aggatccctgtcactacagagtacacaacatgggttcacacatgtcaacacgagtctctg
tgtctcgctgacctggccactaacttcagcaactcagaggagcacatgagtatggtgtac
aggaggatgaatctgcgagacgagaggcagtcgaccggagcagaagcagccgcaaccaca
gcagcaccagaggtcactgggatagcaggtccagaagagacccggactgctgcaccagaa
ccacccactcccgtgaccagtgattccagtgtccctgatgctcctgatgatacagttgaa
gaagaaaccgctgctgaggaggactctgagctgcccaacattattccggagaaccatgtc
gaggagatagtggagttcagcattgacctggtggacccaggctacagggaactactggat
gaccctgactccccccaatatgttgacctctctcaacacctgcaagaccagatgctccat
gtttttgacaagctcccaggatttaaagagatcagtgttttgggaatcagcgaggcccat
gggagtgaaggacctggaggagtgacagtgcactattctctggtctttcagacaatttca
gaggatgacacagggactccagggtcaactgtgcccagcctgcgggaaatggtggccaag
gctttgagtgaagaggcctctctgccagtggatctacagtcattaaactttgaaccagta
aaagggattccaccaactacaacaccagttgaggaagctgttgaggaaacaattgaagat
tccattgagccagctttccacaacgatctggacatatccacagatgagccagagattgcc
atggagaagcctcgtctggatgttccacttggccctgtggaaaaggaaaatgcgctcatc
accttcctggactctacagatattccagaaaaacaagaagaagcagcaccaccagagaga
ggagatgtgccctacatctacaaggacactagtgatgaattagtggagagtgaatctgaa
gcaacaactgaaccagaggaagaggtgccatttatcacacacatgattgaaaccattcaa
gccattgatgagggaactggtgagcttgtaagagactatttcccaacctctcctgccgag
gaataccctgagccaccttttggtaatttagtccctactaatgggtaccctgttttaccc
catgtggatttggatattacctccgcccatgaaataaaaagtatagaaactaatgctcca
gctaaactccttcctaacttgatatcagaggaggaggctgttgttgagaaggaggctgag
cctactccgaccactcagattaagcttaccacagtcattgccactgaggaagaggtatct
aaccctgaattacctgtgacgactctctcagccatcacagatcagcctgccactgaagca
atagaggactttgaagttgaggatgatattatccatattccgattgaaggggaagaggtt
gaggaaccagaacctgaggaagaggtagttgggatctcagaacctgaaaaagcgatagtt
gtggaaccagaacctgaggaagaggtatttgaggaaccagagcccaatgaagacgtagtt
gaagatccagaacctgaggcagatgtagatgaggtcatggtagttaagatcttggaacct
gaggaagagggagttgaggtctcggaacccgaggaagaggtagttaaggcaccagaacct
gaggaagaggtagttgaggaaccagaggaagaggtagttgaggaaccagaggaagaggta
gttgaggaaccagaggaagaggtagttgaggaaccagaggaagaggtagttgaggaacca
gaggaagaggtagttgaggaaccagaggaagaggtagttgagctcttggaacccgaggaa
gaggtagttgaggaactagaacccgaggaagaggtagttgaggaactagaacgcgaggaa
gaggtagttgaggtctcggaacctgagaaagaggtagttgtggaaccagaaactgaggaa
gaggcatttgagggaccagagcctgaggaagaagtaactgaggaaccagaacttgaggaa
gaggtagttgaagaaccggagcccaaggaagatgcagttgaggaaccagaacctgaggta
gaggtagatgaggtctttgtagttgaggtcttggaacctgaggaagaagtagttgagaac
ttggaacctgaggaagatgtagctgaggaactagagcctggtgaaagggtagatgaggtc
tcagagcctggtgaaagggtagatgaggtctcagaacctgatgaagaggtaggtgaggtc
ttggaacctgaggaagaagtagttgagaacttggaacctgaggaagaggtagctgaggaa
ctagagcctggtgaaaaggtagatgaggtctcagaacctgatgaagaggtaggggaggtc
ttggaacctgaggaagaagtagttgagaacttggaacctgaggaagaggtagctgaggaa
ctagagcctggtgaaaaggtagatgaggtctcagaacctgatgaagaggtaggtgaggtc
ttggaacctgaggaagaagtagttgagaacttggaacctgaggaagaggtagctgaggaa
ctagagcctggtgaaaaggtagatggggtctcagaacctgatgaagaggtaggtgaggtc
ttggaacctgaggaagaagtagttgacgaacctgaacctgtggaaggggtagttgagttg
tcagaacctgagaaagaggtacttgaggaattacaaactgaggaagaggttgttgaggtc
ttggaacatgagaaagaggtacttgaggaaatagaacctgaggaagatgtagttgaagaa
ccagaggaagaagtagttgagctcttggaacctgaggaagacgtagttgaggaactaaaa
cctgaggaagcggtagttgaggaaccaaagcctgaggaaatggtagttgaggaaccagaa
cctgaagaaaatgtaattgaggtttcggaacatgaggaaaaagtagttgagaaaacagaa
gaggtatttgaggaactagaacctgaggaagcggttgttgaggaactagaacccgaggaa
gaggtagttgaggaactagaacctgatgaagaggtagttaaggaaccagagcctgaggta
gaggtagttgaggaaccagacccagaggatgaggtagttgcaaaaccagaacatgaggag
gaggtaattgaggaatcagagcctgaggaagatatagttgaggaaccagagcctgaggaa
gaggtagttgacgaactaaaacctgaggaagaggttgttgaggaaccggtagttgaggaa
ctagaacctgcggaagaggtagttgaggaactagaacctgaggaagaggttgttgaggaa
ccagagcccgaggaagaagtagttgaggtctcagaacctaaggaaatggtagttgagaaa
ccagaggaagcagtagttgaggaaccagaacctgaggaagaggtagttgaagaaccagaa
actgaggaagaggtaattgaggtcttggaacatgaggaaaaggtagttgatgaaccagag
gttgatgttgttgaagaaccagcatatgaggaagagataattgaggattcagagcctgag
gaagacatagttgaggaaccagagcctgaggaagcggtagttgaggaactagaacctgcg
gaagaggtagttgaggaactagaacctgaggaagaggttgttgaggaaccagagcctgag
gaagaagtagttgaggtctcagaacctaaggaaatggtagttgagaaaccagaggaagca
gtagttgaggaaccagaacctgaggaagaggtagttgaagaaccagagtttgaggttgtt
gaggaaccagcatatgaggaagaggtaattgaggaatcagagcctgaggaagacatagtt
gaggaaccagagcctgaggaagcggtagttgaggaactagaacctgcggaagaggtagtt
gaggaactagaacctgaggaagaagtagttgaggtctcagaacctaaggaaatggtagtt
gagaaaccagaggaagcagtagttgaggaaccagaacctgaggaagaggtagttgaagaa
ccagaaactgaggaagaggtaattgaggtcttggaacatgaggaaaaggtagttgatgaa
ccagaggttgaggttgttgaagaaccagcatatgaggaagaggtaattgaggaatcagag
cctgaggaagacatagttgaggaaccagagcctgaggaagcggtagttgaagaactagaa
cctgaggaagaggtcgttgaggaactagaacctgaggaagcggtagttgaggaactagaa
cctgagaaagcggtagttgaggaattagaacctaaggaagtggtagttgaggaactagaa
cctaaggaagaggtagttgaggaactagaacctgaggaagaggtagttgagggaccagag
cctgaggaagaggtagttgaggaaccaaagcctgaagaagaggtagttgaggaaccagaa
ccagaggatgcggtagttgaagaaccagaatatgaggaagaggtcattgaggaaacagaa
cctgaggaagaggtagttgaggtcttggaacctgaagaagaggaagttgaagaaccaatg
cctgaggaagaggaagttcaagaaccggagcctgaggaagaggtagttgaagacccagga
cccaaggaagaggtagttgaggtctcggaacctgaggaagaggaagttgaagaaccaatg
cctaaagaagaggaagttgaagaaccggagcctgaggaagaggaagttgaagatccagaa
cctgcggaaggggtagttgaggaaacacagcttgaggaaaatattagtgagccaccagct
gaagaaattaaaatcatccaacctgtggattctttagaggacactctatttggagaggaa
acctggaaacctgatcctgttgaagaggacaatattgtcccaatagaagaccagtcaact
gaggaggacaaggaggaactgttgcctgaataccacgggtatgaggacagctatcctgag
aaagctgttgatactgtggaagaaacagatgacacagcagaggtcagtgaagtggaagtg
gctccattgccagaggagagtgaagagaagatagcaatgatagcagaacccatccctgac
tctacgtcaacaccccctgcagaatctgacactgtgcctgtggtagatgtaacagagtca
ccttcagagttagagctgatggtggaggatactgaggagcctgaggtggttgttatcgat
gaagaggctgaagaggaggtcgtagaggactcagaacctgaggacgagcgtgtgcaagac
cttgcagacgaacttgatcaaatggacctggtaagcacagagcccgttaaccttccagag
gccagtggatactcattggctcctgaggagcaccccgtcgagaccacagcttctccacca
ctgagatacctgaccactccctccatgaccacggcgagtaaaggcagggagctggtggtg
ttcttcagtctacgggttactaacatgaggttctcagatgacctcttcaacaagagctct
tcagaatacagatccctggagaacacctttttggagctgctgctgccttacctgcagtcc
aatctaacaggattcaagaagctagagattcttaacttcaggaatggcagcattgtggtc
aacagcaagatgaagttcaccaagtcagtgccatacaacgtgacccaggccgtccactgt
gtcctggaagacttctgcaacgctgcagccatgagactcaacattgagattgacagtcac
tctctggacatagagcctgctgatcaagcagatccctgtaagttcttggcgtgcaacgac
ttctctcactgtgtggtgaatcggtggtcacgggaggccgaatgtctctgtgacccgggg
tacatggctatggacggcctgccctgtcagagtatctgtgtcctgcagccggactactgc
cagaacgggggccgttgtgagatagtaccaaggcatggagccacttgcagatacccagaa
atgtatacgtcttccaggcctgacaaattaagaacatcgagtgttgaatga
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integrated database retrieval system
