Oncorhynchus nerka (sockeye salmon): 115139640
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Entry
115139640 CDS
T07952
Name
(RefSeq) grainyhead-like protein 1 homolog
KO
K09275
transcription factor CP2 and related proteins
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139640
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
115139640
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
CP2
DUF6039
Motif
Other DBs
NCBI-GeneID:
115139640
NCBI-ProteinID:
XP_029533109
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Position
LG13:complement(29686457..29703746)
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AA seq
606 aa
AA seq
DB search
MTQELGKKRGVLVLQNEPSYSGGQRQAFTEDDEAWRAFLENPLTAASKAMMSINGDEDSA
NALGLLYDYYKVPRDRRTAGQPKTEVLLGDTDPNKINVMMPLQDSPLRAVPRNTAAKGSS
QPSRGDKIRALYPAKEPIVCLSTPPSYSISTGRTLALHSFPVGLPPGPHSSQSDGMAFSH
QLNHSQYSPRAKSLTPDSTYTEPYKDSSNEVFPLSEELQQRMTSIPPGGYPYYSLTASQH
FEYMLEAPQSIRPKSGSGQMSYLNKGQFYPITLRELGGPTVLPHLNGAFRSVVMLVFGEE
KFTDDQLKHWRYWHSRQHTAKQRCIDIADYKESFNTIASIEEIAYNAISFTWDTKDEPRV
FVSVNCLSTDFSPQKGVRGLPLNLQIDTYSCGGHGDKLVHRAYCQIKVFCDKGAERKIRD
EERKQTQRKGRGQETTAACVEDPLKLKHVDITSFKAMSDMNSQPVLFIPEVYFPSTQRHH
TCISDDGEDGLGQKRLLHYDEEFDSATHKRARREEPEKVLLYVRKETEEVFDALMLRTPT
LAGLLEAVSDKYELPLGKMGKVYKRCKKGILVHMDDNIIKHYSNEDAFHIRMEEVGGKVL
LTLTEI
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacacaggagcttggcaaaaagaggggtgttctggtgctccagaatgagccatcgtac
agcggtggtcagcggcaagcattcacggaggatgacgaggcatggagagccttcctggag
aaccccctgacagccgcctccaaggccatgatgagcatcaatggagatgaggacagtgcc
aacgctctgggcctcctctacgactactacaaggtgccacgagataggagaacggctgga
cagcccaaaacagaagtgctcctgggcgatactgatccaaacaaaataaatgtcatgatg
ccactccaagactctcccctgagggccgtccctcgcaacactgcggccaagggcagcagc
caacccagccggggggacaagatccgggctctctacccagccaaagaacccatagtctgc
ctctccacccctccctcctactccatcagcacagggcggaccctggccctgcactccttc
ccagtgggcctcccccctggtccccacagttctcagtccgacggaatggccttcagtcac
cagctcaaccacagccagtacagccccagagccaagagcctcacccccgattccacctac
acagagccctacaaggacagctccaatgaggtcttccctctctcggaggagctccagcaa
cgtatgacctccatccctcccggtggatacccttactacagcttgacagcaagtcaacac
tttgagtacatgctggaggctccccagtctatccggcccaagagcggcagtggccagatg
agttacctgaacaagggccagttctaccccatcaccctaagagagctagggggccccacg
gtcctaccccacctcaatggagcattccgaagtgtggtgatgctggtgtttggagaggaa
aagttcacagatgaccagctcaaacactggagatactggcacagcagacagcacacagcc
aagcagcgctgcattgatattgctgactacaaagagagcttcaatacgattgccagtatt
gaggagattgcctacaatgccatctctttcacatgggacactaaggacgagccacgggtg
tttgtgtcagtgaactgtctgagtacagacttctcccctcaaaagggagtgcggggcctt
cctctcaacctccagattgacacctacagctgtggtggccatggtgacaagctagtgcac
agagcctactgccagatcaaggtgttctgtgacaaaggtgccgagaggaagatccgagac
gaggagaggaagcagactcaaaggaagggaaggggacaggagacaactgcagcctgtgtg
gaagaccctctgaagctgaagcatgtggacataacatcgttcaaagccatgagtgatatg
aactcccagccggtcctcttcatccctgaggtttacttccccagcacccagcgccaccat
acatgcatatcagatgacggtgaggatggcttggggcagaagagactgctccactatgat
gaggaatttgactctgccactcacaagagagccaggagggaggagccagaaaaggtgctg
ctctacgtccgtaaggagacagaggaggtgtttgatgctctaatgctgaggacgcccact
ctggcaggactactggaggctgtatctgataaatatgagctgccgcttggaaaaatgggg
aaagtctacaagaggtgcaaaaaagggatcctagttcatatggacgacaacatcatcaag
cattactccaacgaggatgctttccatatccgcatggaggaggtggggggaaaggtcctg
ctgacactgaccgagatctga
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