Oncorhynchus nerka (sockeye salmon): 115139645
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Entry
115139645 CDS
T07952
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like isoform X1
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115139645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115139645
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115139645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
PH
Ank
Ank_2
SH3_9
BAR
SH3_1
SH3_2
Ank_5
Ank_4
Ank_3
TerS_C
DUF496
PH_9
Motif
Other DBs
NCBI-GeneID:
115139645
NCBI-ProteinID:
XP_029533115
LinkDB
All DBs
Position
LG13:complement(29830177..29881413)
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AA seq
1039 aa
AA seq
DB search
MPQPELITVTEFVAETNEDYKAPTTSNFTTRMSHCRNAVAALEEALDVDRGVLSKIKKSV
KAINNSGLAHFDNEEQYIQSMEKFGDNCVCREDPEVGSAFIKFAVFTKELTALFKNLLQN
MNNIITFPIDSLLKGDLKGVKGDLKKPFDKAWKDYETKLTKIEKEKKEHAKQHGMIRTEF
SGGEIAEEMEKERRLFQFQMCEYLLKVNEIDTKKRVDFLQNLIKYFHAQCNFFQDGLIAV
KSLKPSIEKLATDLITIKQTQDGERKQLSQLRDVLKSSLLSEQKEDSQAKQTGYSLHQLQ
GNKAYGTECSGILHKRSEGLRKVWQKRKCSVKNGFLTISHGTANRPPAKLNLLTCQVKLN
PDEKKSFDLFSHDRTYHFQAEEETECQIWISVLQNSKEEALNNAFKGDQDEGGENNIVQE
LTKAIVSEVKRMSGNDVCCDCGAPKPTWLSTNLGVLICIECSGIHREMGVHYSRIQSLTL
DVLGTAELLLAKNVGNAGFNEIMEADLSARGMTKPNPSSDMQTRKDYITAKYTEKKFVQR
KCADEESRLHVLCEAVKTRNILSLIQVYAEGVDLMETIPLANEHEPGETALHLAVRMVDR
NSLHIVDFLTQNSGNLEKQTAKGSTALHYCCLTDNSECLKLLLRGRASVSIANEAGETPM
DIAKRLRHSQCEELLTQAMTGKFNVHVHVEYEWRLQNEDDDLDESEDEMEDKPIPQRRPE
QERPVSCFVPGNGPMGPMPGGLNMASLARDAASLVRDKQRAHVPSMMMNNETYGAILDLS
PPPRGMPGGPGLHIPPLPPRNTSKGPGWKQAHMEVVGRQRSSSDPPNPHIPERNSSMNVF
PPAVPPAAPPPLVSKRTSVMESRSHKTAPLPPLPSVLPGPPVSPIIPLPPFPPTVPPAPS
FRPTQPPPVPAHHPRSRAARSKSTKSPTISDKPMPNGPPGRLAGPTNRSVKNAPVTGSPQ
SFGPTPPPTPKPRANLPRSRRVKARYSCLADNPDELTFTEGEVIVVDGEEDQEWWVGHIE
GDSTRKGVFPVTFVHLITD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagccggagttgatcacggtcacggaatttgtggccgaaactaatgaggactac
aaagcgcccacaacctccaacttcaccactcggatgtcgcattgtcggaacgccgtggca
gcattggaagaggctctagacgtagaccggggagtactttccaagatcaagaagtctgtc
aaggccataaacaactctggcctggcccactttgacaatgaggagcagtacatccagtct
atggagaagtttggggacaactgtgtctgtagagaggaccctgaggtgggctcagccttc
atcaagtttgccgtctttaccaaagagctcacagccctcttcaagaacctgttgcagaac
atgaacaacatcatcaccttccccatagacagtctactgaaaggagacctgaaaggggtc
aaaggggatctgaaaaagccttttgataaagcctggaaagattacgaaactaaactcact
aagatagagaaggagaagaaggagcatgccaagcagcacgggatgatacggacagagttc
agtggcggagagatcgctgaggagatggagaaggagagacgccttttccagttccagatg
tgtgagtatcttctaaaagtgaatgaaatcgatacgaaaaagagggtcgacttcctccaa
aacctcatcaaatatttccacgcccagtgcaacttcttccaggatgggctaatcgcagtg
aaaagcctcaaaccttccatagagaaactggcgacagacttgattacaatcaaacagacc
caagatggggagaggaaacagctgagtcagctcagagatgttctcaagtcctccctactg
tctgaacagaaagaggactcccaggccaaacagactggatacagccttcatcagctccag
gggaataaggcctacggtacggaatgctctggaattctccataagaggagcgagggcctg
aggaaagtgtggcagaagaggaagtgttctgtgaagaacgggttcctgaccatctcccat
ggaacggcgaacagaccaccagctaaactcaacctgctaacctgtcaagtgaagctcaac
ccagatgagaagaaaagctttgatctcttctcccatgacagaacctatcactttcaagct
gaggaagagactgagtgtcagatatggatctcagtcctgcagaacagtaaggaggaggcg
ctgaacaatgccttcaaaggagaccaggacgagggaggggagaacaacatagtgcaggag
ctgaccaaggccatcgtcagtgaggtcaagaggatgagcggcaacgacgtctgctgcgac
tgtggagcgcctaagcccacctggctctccactaacctgggagtgctcatctgcatcgag
tgttctggaatccacagggagatgggcgtccactattctagaatacagtctctcacactg
gacgtcctgggaaccgcagagctcctgctggcaaaaaatgtgggcaatgcgggtttcaat
gagatcatggaagcggacctgtctgcacggggcatgaccaaacccaacccctccagtgac
atgcagacgcggaaggactacatcacagccaagtacacagagaagaagtttgttcagagg
aagtgtgcggacgaggagtccaggctccacgtcctgtgtgaggcagtgaagacccgaaac
atcctctccctcatccaggtttacgctgaaggagtggacctgatggagaccataccactg
gccaatgagcatgaaccgggtgagacggcactacatctagcagtacgaatggtggaccgc
aactccctccatattgtggacttcctgacccagaacagtggcaacctggagaagcagaca
gccaaagggagcacggcactgcactactgctgccttacagacaacagtgagtgtctgaaa
ctgctgctgcggggccgggcctcggtcagtattgccaacgaggcaggagaaacaccaatg
gacatcgccaagcgcctcagacattcgcagtgtgaagagctgctgacccaggctatgacg
gggaagtttaacgtccatgtgcatgtggaatatgagtggcggctccagaacgaagacgac
gacctggacgagagcgaagacgagatggaggacaagcccatcccccaaagacggccagag
caggagcgtccggtcagctgttttgtcccaggaaatggtcccatgggtcccatgcctgga
ggtctcaacatggcctccttggcccgtgacgcagccagcctggtcagggacaagcagaga
gcccatgtccccagcatgatgatgaacaatgagacctatggcgccatcctggacctcagc
ccccctccccgcggcatgccagggggaccagggttacacatcccacccctgccccccagg
aacaccagcaaaggcccagggtggaagcaggctcatatggaggtggtgggtagacagagg
tcctcctcagaccccccgaaccctcacatcccggagcgtaacagctccatgaatgtgttt
cccccagctgttccacctgctgctccgcctcccctggtgagtaaaaggaccagtgtgatg
gagtctagaagccataagactgctcctctaccaccactaccttcagtattacctgggcct
ccagtgtcccccatcatcccactaccaccattcccgccaacagtgccccctgcaccctcc
ttccgacccacacagccccctcctgtacccgcccaccatcccagaagcagagccgcacgg
tccaaatcaactaaatcacccactatttcagataaacccatgcctaatggaccacccggc
aggcttgctggacccactaatagatccgtaaagaatgcacctgtaactggatcccctcag
agctttggtccaactcctccaccaacacccaagccccgcgctaacctccctaggtccagg
agggtgaaagcccgctacagctgtttagctgataacccagatgagctaacgttcaccgag
ggagaggtgattgtagtggatggagaggaggaccaggagtggtgggtgggacatattgag
ggggattcgactaggaaaggagtcttccctgtgacatttgtgcacttaatcactgactga
DBGET
integrated database retrieval system
