Oncorhynchus nerka (sockeye salmon): 115139651
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Entry
115139651 CDS
T07952
Name
(RefSeq) transcription factor SOX-11-like
KO
K09268
transcription factor SOX11/12 (SOX group C)
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139651
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
115139651
BRITE hierarchy
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
DUF3246
NADH_Oxid_Nqo15
Motif
Other DBs
NCBI-GeneID:
115139651
NCBI-ProteinID:
XP_029533129
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Position
LG13:complement(30356005..30358321)
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AA seq
367 aa
AA seq
DB search
MVQQTEHSETESSREATDTEESELMACSPVPLKSVKADWCKTATGHIKRPMNAFMVWSKV
ERRKIMEQSPDMHNAEISKRLGKRWKLLKDSEKIPFIREAERLRLQHMADYPDYKYRPKK
KPKLDSSTKQAAQSPEKTNIKPVKAPAKKFAKLKTMKAVTTRPSHDPRYDYVFTSFTTSK
SVKMEYSDEDDDEEDYEEEVFSRIKMEEDEEPIPYNIAKVPASPTLSSTAESEGASMYEE
SRNANAAPTRLFYNFKNITKQNTICPASLSPASSFRSVSTSSSSSEDADDLLVDFSLNLA
SSAHGVELGTSNSGNLSLSLVDKDLDSFSEGSLSSHFEFPDYCTPELSEMIAGDWLDANF
SDLVFTY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagcaaacagaacacagtgagacagagagtagcagagaagctacagacactgag
gaaagcgaactgatggcgtgtagcccggtgccactgaaatccgtgaaagctgactggtgc
aagacagcaaccggtcacatcaaacgacccatgaatgcatttatggtgtggtcgaaagtc
gagaggagaaagatcatggagcagtctccggacatgcacaacgcggaaatctccaaaaga
ctgggaaagcggtggaaattgttgaaggacagtgaaaagatcccgtttatcagggaagcc
gagaggctccggctacaacacatggctgactaccctgactacaagtaccgacccaagaag
aaaccaaagcttgacagttccacaaaacaagccgcgcaatcaccggagaagactaacatt
aaacctgtgaaagccccggctaagaaattcgctaaattaaaaactatgaaggcggtgaca
acgagaccgtctcacgaccctcgttatgactatgttttcaccagttttacaactagcaaa
tctgtaaaaatggaatattctgatgaggatgacgacgaagaggactacgaggaggaagtg
ttctctcggattaaaatggaagaggacgaggaaccaataccgtacaacatcgccaaagtg
ccggcgagtcccactctgagctccactgcagagtctgagggtgcgagcatgtacgaggag
tcccggaatgcgaacgcagctcctaccagactgttctacaatttcaagaacattaccaag
cagaacacaatttgccctgcatcactctcaccagcatcttcattcaggtcggtctccacc
tcgtccagttccagcgaagacgccgatgacttactggttgacttcagtttaaatctagcc
tccagtgctcacggagtggagctggggacctcgaattcaggaaatctgtctctttccttg
gtggataaggacttggactctttcagtgagggcagccttagctctcactttgaattccca
gactattgcacccccgaattgagcgaaatgatcgcaggcgattggcttgacgctaacttt
tcagatttggtgtttacctactag
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