KEGG   Oncorhynchus nerka (sockeye salmon): 115139670
Entry
115139670         CDS       T07952                                 
Symbol
dtl
Name
(RefSeq) denticleless protein homolog
  KO
K11790  denticleless
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115139670 (dtl)
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     115139670 (dtl)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40 WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_TEP1_2nd WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR3_2nd WD40_Gbeta DSE1_N EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_NOL10_N Beta-prop_Aladin Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 ASA1 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_SPT8 NBCH_WD40 WD40_RFWD3 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP CFAP251_N WDR54 TAF1C_beta-prop MIOS_WD40
Other DBs
NCBI-GeneID: 115139670
NCBI-ProteinID: XP_029533158
LinkDB
Position
LG13:complement(31795162..31802747)
AA seq 671 aa
MLFRSIVDRGVRKRRRNDLSPKYPLSSLLNGYQCARHDEHISYGNMGVAVPPFGCAFSTA
RGLQSVFAVANEEGVLRLYNTDNRQSPVLKEWMAHENAVFDLAWVPGEASLVTASGDQMA
KLWDVASGELLGSFKGHQCSLKSVAFTQQEKAVFCTGGRDGNIMVWDTRCSKKDGFYRQV
KQISGAHNKMDRNTPSNTKKRRPGTRGMAPSVDSQQSVTVVLFRDAHTLISSGAVDGIIK
MWDLRKSYTAYHHDPIPLQVYPYPGSSTRKLGYSGLVLDSTGSNLFSNCIDDNIYMFNVS
GLKTTPVAVFAGHLNSSFYVKSTVSPDDQFLASGSSDHHTYIWKISDPKQAPMMLQGHNQ
EVTSIAWCPTDFTKIASCSDDNTVRIWRLDRGTDGAKSSVGEANLVGWACPKPATTVSIP
RPLNHMESTPAKSPQAGSLGALSSPQPAACSSSRADVPLPSSTTTASTLQGAKATLLCQK
TPSSIRNWFSRTPGSPWGQVTSPLHTVLSPQSPTGTPPSERRAKRRLETGDCGAAGGCDG
AGECNCITELYPAAKSSRGLVGMCCPSQETPLVGTERSEAWEGADLQVEDPSTQADKENH
SPGGADWLSVMSQRLRKGVGNTSSIPRSPIACKRRDGRMPTSPAMRSPSQAMRSPRSMQK
ISSYFQQKTLE
NT seq 2016 nt   +upstreamnt  +downstreamnt
atgctttttcgctccattgttgacagaggagtccgtaaacggaggcgcaatgacctcagc
ccaaagtacccgttgtcctctctgctgaacggctaccagtgtgcacggcatgatgaacac
atctcatacgggaacatgggggtagccgtgcccccttttggatgcgccttctctacagct
cgagggttgcagagtgtatttgctgtggccaacgaggagggtgtcttgaggctctacaac
acagataacagacagagtccagtcctgaaagaatggatggcacacgagaatgctgtcttt
gaccttgcttgggtgccaggggaggctagcttggtgactgcatccggtgatcagatggcc
aagctgtgggacgtggcatcgggggaactccttggcagcttcaaggggcaccagtgcagc
ctcaagtctgtggcattcacacagcaggagaaagctgtgttctgtactgggggccgagat
gggaatattatggtctgggacaccaggtgcagcaaaaaagatggattctacaggcaggtg
aagcagatcagtggggctcacaataagatggatagaaacacaccctctaacacgaagaag
agacgcccaggcacacgtggcatggccccctctgtggactcccaacagagtgtcaccgtg
gtgctgttccgtgatgcacacaccctcatctcttcaggagctgttgatgggataatcaag
atgtgggaccttcggaaaagctacactgcataccaccacgatcccataccgctccaggtg
tacccgtacccaggctccagcacacgaaagctaggttactcggggctggtgttggactcc
accggctccaacctgttctccaactgcatcgacgacaacatctacatgtttaacgtcagt
ggattgaaaaccactccagtggcagtcttcgctggtcacctcaactcctcgttttacgtc
aagtccactgttagcccagacgaccagttcctggctagtggctcaagtgaccatcatacg
tacatctggaagatctccgacccaaagcaggctcctatgatgcttcagggccataaccag
gaagtgacctccatcgcgtggtgcccaacagatttcacaaagattgcttcctgctctgac
gacaacaccgtacggatctggcgtctggaccgggggacggatggagcaaagtcctctgtc
ggagaggccaatctggtgggctgggcatgtcctaaacctgccaccaccgtgtccattcca
aggcctttgaaccacatggagtccaccccagccaagagtccccaggcagggagtctgggg
gccctgtcctccccccagcctgccgcctgctccagtagtagagccgacgtgcctctaccc
tccagcaccaccaccgcctccacccttcagggtgctaaagccaccctcctatgccagaaa
acaccctcttccatcaggaactggttttcccgaacccccgggtctccttggggacaggtc
acctctcctctccacacggtgctcagcccccagagcccaaccggtactcctccctcggag
aggagggccaagcgccgactggagactggtgactgtggggcagcagggggctgcgatggt
gcaggggaatgcaactgcattacggagctctaccctgcagccaagagcagccgaggactg
gtaggcatgtgctgccccagccaggagacacctctggtgggcacggagaggagtgaggcc
tgggaaggagcagacctccaggtggaggacccatccacacaggcagacaaggagaaccac
tctccaggtggggcagactggttgtcagtgatgagccagaggctgaggaagggtgtggga
aacaccagcagcattcccagaagccccattgcctgcaagaggcgagatggcaggatgccc
acctcaccggcaatgcgctctccctcccaagcaatgcgctcaccacgatccatgcagaaa
atatcctcctacttccagcaaaagactttggagtaa

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