Oncorhynchus nerka (sockeye salmon): 115139687
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Entry
115139687 CDS
T07952
Symbol
hhla1
Name
(RefSeq) HERV-H LTR-associating protein 1 isoform X1
KO
K25558
HERV-H LTR-associating protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115139687 (hhla1)
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NCBI-GeneID:
115139687
NCBI-ProteinID:
XP_029533194
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Position
LG13:32685142..32790493
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AA seq
664 aa
AA seq
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MMAGFWASRNHSKLCLRTCVAILLLLVFFHIAQRHGNQEEIYKRDLLASTEIPAEYIDPT
SIDLTPLVNTLIHSTQLGSSQLFSLLSVTSHSSLALHKLTLLVYNICFVVSNFRSIADNM
FPRRYCYCVTNETNDLTDFTAILLDVMGNSTSYLQELFKSSSILSVSQNNISDCIYICVM
AGKSDKYLSQLWEVDSIMPLFNQTITESAHKGNHSVNFDPSLTSRVHSTAHVSSTASEMT
STAPPTTTRTTSFLTSTRAQPTTTTPSPTTKTRTRTTGRPTSISVPYTTTSRTTVLMTPT
TALPITITAQPTITKAPPSTTTAQPSRSTALPTTTQSTTDRPTTYTALPTTAQPTTALPI
PALLPTTTVLPTTTTAQPTTTTALRIMTTATPTAAQPIPTSVQPTKVPSSTTTDQLTTTA
QPTTTTPQLTTVQVTTTTTQLTTTTDQPTTALLWPTIPTIRFRMTTTPVRLTMTTTPSTI
TAILITATKAQPTTDPPATGQAITTTQQLPTAQQTTTTTQLTTTTAPWTITNITTTATRV
ITKAPITEKPGCPWRKPGLTKIEERSDNSITSSTTTTVSAHKLQPCVLELCKFFSQCLCH
SYSYKTHMKRYCADSHLWYEKHTFEVCRRVRRVSFSRNLKQRCLARMCNKLWPEWKRDRE
SGIY
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaggcttttgggcatcaaggaatcactcaaagctgtgtctcaggacatgtgta
gctattctgctcctcctagtcttctttcatatagctcaaagacatggcaaccaggaggaa
atatataagagggatcttctagcatcgacagaaatcccggcagagtatattgatccaact
tccatcgatctcactcccttggtcaatacgttaattcattcaacacaattaggctcaagt
cagctcttctctttgttgagtgtgacctcacacagctccctggctcttcacaagctcact
ctactggtctataacatttgttttgtagtttctaatttcagaagtatcgcggacaacatg
tttccaagaaggtattgctattgtgtaacaaacgagacaaacgacttaacagacttcact
gccatattgttggatgttatgggaaattccacaagctatctacaagagctattcaaatct
agctccatattatcagtgagccaaaataatatttctgactgcatatatatctgtgtaatg
gcaggtaaatcagataaatacctgtctcaactctgggaagttgactccatcatgcctctg
ttcaatcagaccattacagaaagcgcacataaaggtaaccattctgtcaattttgatccg
tccctaaccagtagagtccactccactgcacatgtatcttccacagcctcagaaatgacc
tctacagctccaccgaccacaaccagaaccacatccttcttgacctcaacaagagctcaa
cccaccacaaccacaccctcaccgactacaaagaccagaaccagaactacaggtcgaccg
acctcaatatcagttccttataccactacaagcagaactacagtcctaatgaccccaact
acagcccttccgatcacaatcacagcccaaccaaccataaccaaagccccaccgtccaca
accacagcccaaccaagtagatctacagccctaccaaccacaacccaatcaaccacagac
cgaccaaccacatatacagccctaccaaccacagcccaaccaactacagctttaccaatc
ccagccctactgcctacaactacagtcctacccaccacaaccacagcccaaccaaccaca
actacagccctacgaatcatgaccacagccacgccaactgcagctcaaccaattccaacc
tcagtgcaaccgaccaaagtcccatcatccacaaccacagaccaactgaccacaacagct
caaccgactacaaccacaccacaactgaccacagtccaagtgacgacaaccacaacccaa
ctgaccacaaccacagaccaaccaaccacagccttgctgtggccaaccatacccacaatc
agattccgaatgacgacaaccccagttcgacttactatgaccacaaccccatcgaccata
accgcaatcctgataaccgcaaccaaagcacaaccaaccacagacccaccagccacaggc
caagctattacaaccacacaacaattgcccacagcccaacaaactacaaccacaacacaa
ctaactacaaccacagccccatggaccattaccaatataaccacgaccgcaaccagagtg
atcaccaaagcacccatcacagagaaaccaggctgcccatggagaaagcctggcttgacc
aaaatagaagagcggagtgacaactccattactagcagcaccaccaccactgtgagtgct
cacaagctacagccctgcgtactcgagctctgcaagttcttctcccagtgcctctgccac
tcctacagctacaagactcacatgaagaggtattgtgctgatagtcacctgtggtatgag
aaacatacctttgaggtgtgtagacgggtcagaagagtctctttctccagaaatctaaaa
cagaggtgccttgcaagaatgtgcaacaaactctggccagagtggaaaagagacagagag
agcgggatatactga
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