Oncorhynchus nerka (sockeye salmon): 115139692
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Entry
115139692 CDS
T07952
Symbol
rasef
Name
(RefSeq) ras and EF-hand domain-containing protein isoform X1
KO
K17199
Ras and EF-hand domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
one04031
]
115139692 (rasef)
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115139692 (rasef)
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rab Family
Rab45
115139692 (rasef)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
115139692 (rasef)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
EF-hand_7
EF-hand_1
EF-hand_6
MMR_HSR1
EF-hand_5
EF-hand_8
GTP_EFTU
ATG16
EH
ACBP4_C
DUF1848
AAA_25
AAA_24
DUF3613
Motif
Other DBs
NCBI-GeneID:
115139692
NCBI-ProteinID:
XP_029533209
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All DBs
Position
LG13:complement(33041357..33094421)
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AA seq
731 aa
AA seq
DB search
MSLPAMGMNRQSLCSLFHACDVDNSGRIEKDEFFQICSELLVPPTEREHIFSKLDIDRDG
TINLAEFISGFHRISEQVYRGDMESKSWGVSSQAWEDFQTRLGDHARFIPRNEQAATLYQ
NISMTEPRMVPQYERVIMSFTREIKQHNAEMENLALAVKRAHDQAAMQLSEMEEEMDQRI
HAAENNTQQQEAKRTEAALSELKRHYESEVCELQHKLQKMQLIEDQYKNINMKDESSTLK
RKINELTLENQRLKQELMQSQTNIAFLQSELASLKSDLTDHSINSERDEAMMRDFSDERE
NLERQIEILQTANRKLHDSNDGLRSSLENTLSKSIKRGSSASPASTISRRSKSICYSSPY
RDRFYQAGVDGVDADGDLLGLCGGEGGRSSLGCRRPSLDTLALALCDPAMQVKRSREVDS
LPESSLDSGMSTLRGSNNEYDSEQEVKGHEEEQRVAGNTDSLAGGHSDNDVAEMRDEMVF
GSDSDSVLDWKPLESVSRTSSGASTRKALSAITNEGKEKESADLGYMTSEKAYRVVLAGD
AAVGKSSFLLRLCKNEFRGNTSATLGVDFQMKTLVVDGEPTLLQLWDTAGQERFRSIAKS
YFRRADGVLLLYDVTCEKSFLNVREWVDMIEDVSQDDVPIMLVGNKCDLREQALQDSVTC
VPTSFGEKLAMTYNALFCETSAKDGSNVIEAVLHLAREMTKQVHGDENQESVTNLYRSPN
KKMPTVTCCTG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaccagccatgggtatgaaccggcagagtctctgctcgctctttcacgcttgt
gatgtggataattctggaaggattgaaaaagacgagtttttccaaatctgctcagagctc
cttgtcccgccgacggagagagagcacattttctctaaactggacatcgacagagacggg
acaatcaatctagcggagttcattagcggcttccaccggatctctgagcaagtgtaccga
ggggacatggagagcaagagctggggagtctcctctcaggcctgggaagatttccagacc
cgactaggggaccatgcccggttcatacccaggaatgagcaggcagccacgctgtaccag
aacatcagtatgacagagcccaggatggtgcctcagtatgagagagtcattatgagcttc
acaagagagatcaagcagcacaatgctgagatggagaacctggccctggctgtgaaacga
gcccatgaccaagccgccatgcagctcagcgagatggaggaggagatggatcaacgcatc
catgcagctgagaacaacacacagcaacaggaggccaagaggactgaggcagctctgagt
gagctgaagagacactatgagtctgaggtgtgtgaactgcagcacaagctccagaagatg
cagctgattgaagaccagtacaagaacatcaacatgaaagatgagtcttcaaccctgaag
agaaagatcaacgaactgactctggaaaaccagcggttgaagcaggagttgatgcagtct
caaactaacatagcctttcttcagagtgaactggcctctctgaagagtgatctgacagac
cacagcatcaactctgagcgggatgaggcgatgatgagagacttctctgatgagagggag
aacctggagcgacagatagagatcctacaaacagccaacaggaagctccatgacagtaac
gacgggctgcgcagttccctggagaacaccctcagcaagagcattaagcgtggtagcagt
gcttccccagccagcaccattagcaggaggagcaagagtatctgttactcatctccatac
cgtgacaggttctaccaggcgggtgtggatggtgtggatgcggacggagacctgctgggc
ctttgtggaggtgaaggtggtaggagttctctggggtgtcggcggcccagtctggacacc
ctagccctggctctgtgtgacccggccatgcaggtaaaacgcagcagggaggtagacagc
ctgcccgagagctccctagacagtggcatgtccaccctgcgtggctccaacaacgaatat
gactctgagcaggaggtgaaagggcacgaggaggaacagagggtggcagggaacacagac
agcctggcggggggccactctgacaatgacgttgcagagatgcgtgatgagatggtgttt
ggatcagacagtgattctgtcctggactggaaacctttggagtcagtcagccggaccagc
tctggagcgtccacacgcaaagccctctctgccatcaccaatgagggtaaagagaaggag
tcagctgacctgggctatatgacatcagagaaggcctacagggtggtgttggctggcgat
gcagcggtgggcaagtccagcttcctgctccgcctctgcaagaacgagttccgaggaaac
accagcgccaccctgggggtggactttcagatgaagactctagtagtggatggagagccc
accctactacagttgtgggacacagcaggccaggagaggttccgcagcattgcgaagtcg
tacttcagacgagccgacggggtcctcctgctgtatgatgtcacctgtgaaaagagcttt
ctcaacgtgagagaatgggtggacatgattgaggacgtgtcccaggatgacgttcccatc
atgctagttggaaataagtgtgacctgagggagcaagcgctacaggacagtgtcacctgt
gtccccaccagcttcggagagaagctggccatgacatataacgccctcttctgtgagacc
agtgctaaagacggatctaatgtcatagaggccgtgctgcatctggccagagagatgacc
aagcaggttcatggggatgagaaccaggagtctgtgaccaacctctacagaagtcccaac
aagaagatgcccactgtcacctgctgcacaggataa
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