Oncorhynchus nerka (sockeye salmon): 115139697
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Entry
115139697 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 6-like
KO
K10154
interferon regulatory factor 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139697
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115139697
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
115139697
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115139697
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF-3
IRF
ERbeta_N
Motif
Other DBs
NCBI-GeneID:
115139697
NCBI-ProteinID:
XP_029533231
LinkDB
All DBs
Position
LG2:complement(40014473..40019144)
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AA seq
487 aa
AA seq
DB search
MALTPRRVRLKPWLVDQVDSGFYPGLVWIDRDNKRFRIPWKHATRHTTQHEEENTIFKAW
ALETGKFQEGIDDPDPAKWKAQLRCALNKSREFNLVYDGTKEVPMNPLKIYDICDIPQPL
SNPGSSDPGSWTPNDGDEDESDGSEPLPPYPKSNGTSPALMWSPPGSVSPLQPPSCPPSV
EVWPKEEVKLWPKEEPLDMEMQPSPLEMAPPXPPLDMPPPPMPDVMFASPEMWISSLPMT
DLEVQFQYRGKEVCPAMTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPSTEHIAN
DTQRVFTNRLLDVMDRGLVLEISGHDIYAIRLCQCKVYWSGPCAPNPKAPNLIERQRKIK
LFCLESFLSDVIAHQRGQSASPPQFDINLCFGEEWPDSRPKEKKLIMVQIIPVVARMITE
MFSGDCMRSFDSGSVRLQISIPDIKDNIVTHLKQLYRLLQTHQGQEGWPQALAPGAGMHL
SPALHAQ
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgttgaccccgcggcgtgtccggctcaagccctggctagtggaccaggtggacagt
gggttctacccaggcctggtgtggattgaccgagacaataagcgcttcaggatcccctgg
aaacacgctacacggcacaccacccagcacgaggaagaaaacactatttttaaggcctgg
gcgttagagaccggaaagttccaggagggtattgatgatcctgaccctgccaagtggaaa
gctcagctccgctgcgccctcaacaagagcagagagttcaaccttgtctacgatggcacc
aaagaagtccccatgaaccccctgaagatctacgacatctgtgacatcccacagcccctc
agtaacccaggatcttcagaccctgggtcttggacaccaaatgatggggatgaagatgaa
tcagatggctcagagcccctccctccttatccaaaatccaacggcaccagccccgctctt
atgtggtctccaccggggtctgtatcgcccctccaaccccccagctgccccccatcagtt
gaagtgtggcccaaagaggaagttaagctgtggcccaaagaggagcctttggatatggag
atgcagccttcgcccctggagatggcaccccccncccccccactggacatgcctccccct
cccatgcctgacgtgatgtttgcctccccggagatgtggatcagctccttgcctatgaca
gacctggaggtgcagttccagtaccgtggtaaggaggtgtgtccagccatgacggtcagt
aacccccagggctgtaggcttttctacggggacctaggtcccatggtcaaccaggaggag
ctgtttggtcctatcagcctggagcagctgaggttcccctctactgagcacatcgccaac
gacacgcagagggtcttcaccaaccgcctgctggatgtcatggaccgaggcctcgtcctg
gagatcagcggccatgacatctatgccatccgcctctgccaatgcaaggtgtactggtca
ggcccttgcgcccccaaccccaaagcacccaacctcatagagaggcagaggaagatcaag
ctgttctgtctggagtcctttctcagtgatgtgatagcccatcagaggggccagtcggcc
agccctcctcagtttgacatcaacctgtgcttcggagaggagtggcctgacagcagaccc
aaagagaagaagctcatcatggtgcagattattccagtggtagcacgtatgatcactgag
atgttctcaggcgactgcatgcgctccttcgacagcggcagcgtgcgcctgcagatctcc
atcccagacatcaaggacaacatcgtgacccacctgaagcagctgtaccgcctgctgcag
acccaccagggccaggaaggctggcctcaggctctggccccaggagccggcatgcacctg
tccccggccctgcatgcccagtga
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