Oncorhynchus nerka (sockeye salmon): 115139700
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Entry
115139700 CDS
T07952
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115139700
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
115139700
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
115139700
NCBI-ProteinID:
XP_029533236
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Position
LG13:33574659..33579763
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AA seq
615 aa
AA seq
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MDLQTAVFNAARDGKLRLLQKLLENKTGLEVTKLMAEKTNGATSLLMAARYGHLDLVEYL
LECCCAPVEVGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLDIVKYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLEKDADVNRKSV
KGNTALHDCAESGSLEIMKMLLKYGATMERDGYGMTPLLSASVTGHTNIVDYLTQHQQTN
HMERINALELLGATFVDKKRDLLGALKYWKRAMDLRYSDSKNVLNKAEPKQLIMAYDYAR
EVSNGEELDSLISDPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQSNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFNDLMGILSKSVL
EIERAVKQTQPDPAQLSKALSIILHLICLLEKVPCTVEQDHFKKETIYRFLKLQPCGKNG
YSPLHLAVDRNTTCVGRYPVCKFPSFQVTSILLECGADVNCRDEDNNSPLHVAASNNHPD
IMNLLIACGTHFDSTNSLKQTACDLLDEKEMAKNLIQPINHTTLQCLAARAIIKHSLCYR
GNIPEKLEAFVLLHR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaaacggcggtgttcaatgcagccagagatggcaagctacggttgcttcag
aaacttttggagaacaaaactggcctagaggttaccaaattaatggcagagaaaaccaac
ggtgcgacctctttgcttatggctgcaagatacggacacctggatttagtggaatatctt
ttggagtgttgctgcgcaccggttgaggttggggggtcagtgaattttgatggagagact
atcgaaggtgccccccctctatgggctgcctcagcagcaggacacctgaaagtcgtgcag
tctttacttggccacggtgcctctgtgaacaatacaacactcaccaattccacccccctg
agagcagcctgcttcgatgggcatctggacattgtaaaatacctggtagagcacaaggca
gacctggaagtagcaaacagacatggtcacacatgcctcatgatctcgtgttacaaagga
cacaaggaaattgcccagtatctattggagaaagacgctgatgttaacaggaaaagtgtt
aaaggtaacaccgcattacatgactgtgctgaatctggcagcttggagataatgaagatg
ctgctaaaatatggtgccaccatggagagggatggttatggaatgaccccactgctgtct
gctagtgtgactggccacactaacattgttgactatctgacacaacaccagcaaacaaac
cacatggagaggataaacgccctcgaactgcttggtgctacttttgtggacaaaaagagg
gatcttcttggggcattaaagtactggaagagggccatggacctgagatacagtgacagc
aaaaatgttcttaacaaagctgagccaaagcagttgatcatggcctatgactatgccagg
gaagtaagtaatggggaggagctagacagcctgatctcagaccccgatgagatgaggatg
caggccctgctcattagagaacgcatcctgggcccctcccaccccgacacctcttactac
atccgctaccggggagctgtatacgctgactctgggaattttgagcgctgcatcaacctt
tggaagtatgcccttgacatgcagcagagcaacttggaccccctcagccccatgacagcc
agcagcttgctgtccttcgctgaactattctccttcatgctccaggaccgtgctaaaggc
cttctggggacctctgtctccttcaacgacctcatgggcatcctcagtaagagcgtgctg
gagattgaacgtgcggtgaaacaaacccagcctgacccggctcagctcagcaaggccctc
tccatcatcctgcatctcatctgcctgctggagaaggtcccctgtaccgtggagcaggac
catttcaagaaggagaccatctacaggttcctcaagctgcagccctgtgggaagaatggc
tacagcccgctccacctggccgtggacaggaacaccacctgcgtgggccgctatcctgtc
tgtaagttcccctctttccaggtcacctctatcctactggagtgtggggcggacgtcaat
tgccgcgacgaggacaacaacagccctctgcatgtggccgcctccaacaatcacccggac
atcatgaacctgctgattgcctgcggcacgcactttgacagcaccaactccctgaagcag
acggcctgcgacctgctggacgagaaggagatggccaagaacctgatccagcccatcaac
cacaccaccctgcagtgtctggctgcacgggctatcatcaagcacagcctctgctacaga
ggaaacatcccagagaagctggaggcctttgtgcttctccacagataa
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