Oncorhynchus nerka (sockeye salmon): 115139705
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Entry
115139705 CDS
T07952
Name
(RefSeq) glutamate receptor ionotropic, delta-2 isoform X1
KO
K05207
glutamate receptor delta-2 subunit
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115139705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115139705
Ion channels [BR:
one04040
]
Ligand-gated channels
Glutamate (ionotropic)
115139705
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF6724
Motif
Other DBs
NCBI-GeneID:
115139705
NCBI-ProteinID:
XP_029533248
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All DBs
Position
LG13:33776563..34360836
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AA seq
1010 aa
AA seq
DB search
MKVVSAVLFLAIFWSQEWEPVNSDSIIHIGAIFDESARKDDEVFRMAVADLNLNNEILET
EKITISVEFVDGNNPFQAVQEACELMNRGILALVSSIGCMSAGSLQSLADAMHIPHLFIQ
RATAGSPRSSCPLITTRTRQDDYTLFVRPPVYLNDVILQVVSEYSWQKFIIFYDQEYDIR
GIQDFLDKTSQQGMDVSLQKVESNINMMITSMFRTMRVEELHRYRDTLRRAVLFMSPATA
KAFITEVVETNLVAFDCHWIIINEEISDQDVQELVMKSIGRLTLIRQIFPLPQNTSQRCV
KHNHRINTSLCDPKDPKAQTLEITNRYIYDTVLLLANTFHRKLEDRKWHSMASLTCIRKN
SKPWQGGRPMLDNVKKSGVSGLTGFLEFTDNGTNPNIYFEILGTNYGEDRGRGVIKLATW
DPVHGLNGTLTDRKLENNMRGVVLRVVTVLEEPFVMVSENVLGKPKKYQGYSIDVLDALS
NYLGFKYEIYVAPDHKYGSQQADGVWNGLIGELVAKRADMGLSALTITPERESVVDFTTR
YMDYSVGVLLRKAERTVDMFACLAPFDLSLWACIAGTVLLVGILVYLLNWLNPPRLPMGS
VSSTTLYNSMWFVYGSFVQQGGEVPYTTLATRMMMGVWWLFALIVLSSYTANLAAFLTIS
RIENSIQSLQDLSKQTELPYGTVLDSAVYEQVRSKAMNPFERDPMYSQMWRMINRTGGAD
NNVEESKEGIRKVKYGHFAFVWDVAVLEYVGINDEDCSFYTVGNKAPDRGYGIALQHGSP
YRDIFSQRILELQQNGDMDILKLKWWPRDSPCDLYSAVHTKHRGSALDIHSFAGVFCVLA
AGVVLSCLIAMVETWWTRRKGSRVPSKEDDKEIDLEHLHRRVNSLCTEDDSPHKQFSTSS
IDLTPLDMDSMPANRQALEQISDFRNTHITTTTFIPEQIQTLSRSLSAKAQQGFAFGPVQ
DHRTGGPFRQRAPNGGFFRSPIKTMSSIPYQPTPQPNFGYGNDPDRGTSI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgtttcagcagtgttgttccttgccatattttggagtcaggagtgggagccc
gtgaattctgattcaatcatacacatcggggccatctttgacgagtctgccaggaaggat
gacgaggtgttccgcatggccgtggcggacctcaacctcaacaacgagatcctggagacg
gagaagatcaccatctccgtggagtttgtggacgggaacaaccctttccaggcagtccag
gaagcctgtgagttgatgaacagggggatcctggcgctggtcagctctatcggctgtatg
tcggcgggctcccttcagtctctggcggacgcgatgcacatcccgcacctcttcatccag
cgtgccactgccgggtcccctcgctccagctgccccctcatcaccacccgcacccgccag
gatgactataccctcttcgtgcgcccacccgtctacctcaatgacgtcatcctccaagtg
gtcagcgagtacagctggcagaagttcatcatcttctacgaccaggaatacgatatccgt
gggatccaggacttcctggacaagacgtctcagcaaggcatggacgtgtcgcttcagaag
gtggagtccaacatcaacatgatgattaccagcatgttccggaccatgagggtggaggag
ctccaccgctaccgggacacgctgcgccgggccgtgctcttcatgagccctgccactgcc
aaagccttcatcactgaggttgtggagacgaacctcgtggcattcgactgccactggatc
atcatcaatgaggagatctcagaccaggacgtccaggagctggttatgaagtctatcggg
cgtctgactctgatcaggcagatcttccccctgccccagaacaccagccagcgctgtgtc
aagcacaaccaccgcatcaacacctccctctgtgaccccaaagaccccaaggctcagaca
ctggagataaccaaccgctacatctacgacacggtgctgctattggccaacaccttccac
aggaaactggaggacaggaagtggcacagcatggccagcctcacctgcatccgcaagaac
tccaagccctggcaaggcgggcgccccatgctagacaacgtcaaaaagtctggagtgagt
ggtctgaccggcttcctggagtttaccgacaacggaaccaaccccaacatctactttgag
atcctggggaccaattatggcgaggacagggggaggggtgtcatcaagctggccacctgg
gatccagtgcatggcctcaatggaacactaactgacaggaagttggagaacaacatgaga
ggtgtggttctgcgcgtggtcactgtgctggaggagccctttgtgatggtgtcagagaat
gtccttgggaagccaaagaagtaccaaggctattccatcgacgtgctggatgctctctcc
aactacctgggcttcaagtacgagatctacgtggcccctgaccataagtatgggagccaa
caggctgacggggtctggaacggactaatcggagagttggttgctaagcgtgctgacatg
ggtctctcggctctcaccatcacaccagagcgggagagtgtggtggactttaccacgcgc
tacatggactactcggtgggcgtgctgctcaggaaggctgaacgcaccgtggacatgttc
gcctgcctggcgccctttgacctgtcgctatgggcatgcatcgcgggcacggtgctactg
gtgggcatactggtctacctgctcaattggctcaacccgccgcgcctgcccatgggctcc
gtctcctccaccaccctctacaactccatgtggtttgtctacggatcattcgtccagcag
ggtggtgaggttccgtataccaccctggccacgaggatgatgatgggggtatggtggctc
tttgctttgatcgtcctctcctcctacacggccaacctggctgccttcctcaccatcagc
cgtatcgagaactccatccagtctctccaggacctgtccaagcagacagagttgccctac
gggacggtgttggactcggctgtgtacgagcaggtgcgcagtaaggccatgaaccccttt
gaaagggaccccatgtactcccagatgtggcgtatgatcaaccgcaccggaggggccgac
aacaacgtggaggagtccaaggagggcatccgcaaggtgaagtacggccattttgccttt
gtgtgggatgtggcagtgctggagtatgtgggcatcaacgatgaggactgctccttctac
actgtggggaacaaggcaccagaccggggatacggcatcgccctgcagcacggcagtcca
tacagggacatcttctcccagaggatcctggagctgcagcagaacggggacatggacatc
ctgaagctgaagtggtggccccgggacagcccgtgtgacctgtactctgcggtgcacacc
aaacaccgcggcagcgccctggacatccacagcttcgccggcgtgttctgcgtgctggca
gcgggtgtggtgctctcctgtctcatcgccatggtggagacctggtggactaggaggaag
ggctcacgagtcccctccaaagaggatgataaggagatcgacctggagcaccttcaccgc
cgggttaacagcctgtgcacagaggacgacagcccccacaaacagttctccacctcctcc
attgacctgacgccactggacatggactctatgccggccaaccggcaggctctggagcag
atcagcgacttccgaaacacgcacatcaccactaccaccttcatccccgagcagatccag
accctcagccgcagcctgtctgccaaggcccaacagggcttcgccttcggtcccgtgcag
gaccaccggactggggggcccttcaggcagagagcccccaacggaggcttcttccgcagc
cccatcaagactatgtcctccataccctaccagcccactccccagcccaacttcggctac
ggcaacgacccagaccggggcacgtccatatga
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