Oncorhynchus nerka (sockeye salmon): 115139719
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Entry
115139719 CDS
T07952
Name
(RefSeq) rho-related BTB domain-containing protein 1-like isoform X1
KO
K07868
Rho-related BTB domain-containing protein 1/2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115139719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115139719
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
one04031
]
115139719
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
115139719
GTP-binding proteins [BR:
one04031
]
Small (monomeric) G-proteins
Rho Family
RhoBTB
115139719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
Ras
Roc
FAM186A-B_N
Motif
Other DBs
NCBI-GeneID:
115139719
NCBI-ProteinID:
XP_029533272
LinkDB
All DBs
Position
LG13:complement(35076557..35179690)
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AA seq
728 aa
AA seq
DB search
MWVNTGTVGRALSMDIDTDYERPNVETIKCVVVGDNAVGKTRLICARACNATLTQYQLLA
THVPTVWAIDQYRVCQEVLERSRDVVDEVSVSLRLWDTFGDHHKDRRFAYGRSDVVVLCF
SLANPNSLRHVRTMWYPEIKHFCPRTPIILVGCQLDLRYADLEAVNRARRPLAKPIKPTD
ILPPERGHEVAKELGIPYFETSIVAQFGVKDVFDNAIRSALISRRHLQFWKSHLKRVQRP
LLQAPFLPPRPPRPVVGIPDPPPIDGEAPDSLFCQSLCADVLFLLQGGATRVFAHKVYLA
TSCSKFYDLFTLDLLATESDWEGEERAESGEEDEQNRRGAKEQAGRTKSLDIDKEGEGGA
RGLKRPPMLQQGSLRTSKSDNALPARSQCPLGPLGAGRGLSGWGRGFLSVYLEHIADPET
GRLRLMTVVSMDGLIQEEPFQAVLQYLYTGSLDESRGGLMQVATIAELLEVFDLRMMVAN
VLNRESFMNQEITKAFHVRRANRIKECLSKGTFADVVFHLDDGYLPAHKPLLISSCDWMA
AMFRGSFVESYIEEVSIPDTSSSCMRAVLEFMYCGLLSPCPDLEPIELIVLSNRLCLPRL
VALTEQHAVNELLQWAMKGVDIDGQVLAYLELAQFHNAKQLSAWCLHHICTNYNSVCRKF
PKDMKVMSPENQRHFEKQRWPPVWFLKEEDRYLRSQKEREREEEILRKLRTKRGWCFSRH
PSSSPHVS
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtcaataccggaacagtcggaagggccctctccatggatatagacacagactat
gagcggcccaacgtggaaaccattaaatgtgttgtggtaggggacaacgcggtgggcaag
actaggctcatctgtgcccgcgcctgcaatgccaccctcacacagtaccagctgctcgcc
acccacgtgccaactgtctgggccattgaccagtaccgcgtgtgccaggaggtgttggag
agatcacgggatgttgtggatgaggtcagtgtgtccctgagactatgggacaccttcggt
gaccatcacaaagacagacgcttcgcgtatggcaggtctgacgtggtggtgctgtgtttc
tccctggccaaccccaactccctgcgccacgtccgcaccatgtggtaccctgagattaag
cacttctgcccccgcacccctatcatcctggtgggctgccagctggacctgcgctatgcc
gacctggaggctgtcaaccgcgcccgcagacccctagccaaacccatcaagcctacagac
atcctacctccagagagaggccacgaggtggcaaaggagctgggcattccctactttgag
accagcatcgtggcccagtttggggtaaaggatgtgttcgacaatgctatccgttctgcc
cttatctcccgtcgccacctccagttctggaagtcccacctgaagagagtccagcggccc
ctcctccaggccccgttcctgcccccccgtccccctcgccctgtggttggcatccccgac
ccccctcccatcgatggagaggcccctgattccctcttctgccagtcgctgtgcgccgac
gtcctcttcctcctccagggcggtgctacgcgcgtcttcgcacacaaagtctacctggcc
acatcctgctccaagttctatgacctcttcaccctggacctgctggctactgagtcagat
tgggagggagaggagcgagccgagagtggggaggaggacgagcagaacaggagaggggcc
aaagagcaggcggggcgcacgaagagcttggacatcgataaggagggggaggggggcgcc
aggggactcaaacggccacccatgctccagcagggctccctgaggacttccaaaagtgat
aacgccctccccgccaggagccagtgccctctggggcccctgggagccggccgtggcctc
tcgggatgggggaggggcttcctgagtgtgtacctggagcacatagctgaccctgagaca
gggcgacttcgcctcatgactgtggtctccatggacggtctcatacaggaagaacccttc
caggcggtgctgcagtacctgtacacaggcagtctggacgagagccgagggggcctgatg
caggtggccaccatcgccgagctgctggaggtgtttgacctgaggatgatggtggccaac
gtgctgaaccgtgaaagcttcatgaaccaggagatcaccaaggccttccatgtccgccga
gccaaccgcatcaaagagtgcctcagcaagggtaccttcgccgatgtggtgttccacctg
gacgatggatacctgccggcccacaagcccctgctcatctccagctgcgactggatggcg
gccatgttccggggatccttcgtggagagctacatcgaggaggtgtccatccctgacacc
agtagctcctgtatgcgtgcagtgttggagttcatgtactgtggactgctttcaccctgt
cctgatctggagcctattgagcttatcgtcctatccaaccggctgtgtctgccacgcctt
gttgccctcacagagcagcatgctgtgaatgagctgctccagtgggcgatgaagggagtg
gacatcgacggacaggtgctggcttacctggagttggctcagttccacaatgccaagcag
ctgtctgcctggtgtctccatcacatctgcaccaactacaacagcgtctgtcgcaagttc
cctaaagacatgaaggtcatgtctccagagaaccagaggcactttgagaagcagcggtgg
cctccggtgtggttcctgaaggaggaggaccgctacctgcgctctcagaaggagcgcgag
cgcgaggaggagatcctacgcaagctgcgcaccaagagaggctggtgcttctcgagacac
ccgtcctcctcgccccatgtctcctga
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