KEGG   Oncorhynchus nerka (sockeye salmon): 115139726
Entry
115139726         CDS       T07952                                 
Name
(RefSeq) methylosome protein 50-like isoform X1
  KO
K13221  methylosome protein 50
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:one03041]
    115139726
   03036 Chromosome and associated proteins [BR:one03036]
    115139726
Spliceosome [BR:one03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   Other SAPs
    115139726
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    CHTOP-methylosome complex
     115139726
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_RIG_2nd WDR55 Beta-prop_EML_2 Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_TEP1_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st EIF3I Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR3_2nd Beta-prop_WDR75_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_DCAF4 WD40_Gbeta Beta-prop_SPT8 WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_RIG_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_NWD2_C Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 115139726
NCBI-ProteinID: XP_029533296
LinkDB
Position
LG2:complement(40056066..40071280)
AA seq 340 aa
MKSIVNANMIKENGWNIPPNAPACMEKHLESAQYRGDGTLLLGASSLTGRCWQGSIWIYC
DPKQSPNEGFCKAGVQTEAGITDVKWVSERGVLVASDSGAVELWELSEDESLLEKRFAKL
EHDHIVTSVSPAGSSHAISGSMDNRIKVWDLIQGEVVSTYNAHSKPVTCVSCNPSDDSLF
LSCGQDGRLLLWDRRKPTKPASRLVSDVEPSCCPTSVAWHPHHRTTIAYGDELGRVTLKD
FQGAEPGQTQSTHSRRVSGLAFSSHSAPLLASISDDCTVAVMNSALKETLRDKRHQDFVR
GVCWAPGGSDTLTTVGWDHQVLHHVTGQDGPATGYSTSPL
NT seq 1023 nt   +upstreamnt  +downstreamnt
atgaaaagtatagtaaatgccaatatgataaaggaaaacggatggaacatacctccaaat
gcccccgcgtgtatggagaagcatttggagtcggcgcagtacaggggagatggcaccctg
ttgttgggggcctccagtctgacaggcaggtgctggcagggctccatctggatctactgt
gatcccaagcagtctcccaacgagggcttctgtaaggctggtgtccagacagaggcaggc
atcacagatgtaaagtgggtttcagagaggggtgtcctagttgcatctgactctggtgct
gttgagctgtgggagctatcagaggatgagagtctgctggagaaacggttcgccaaactc
gagcatgatcacatcgttaccagcgtgagccctgctgggtcaagccatgccatcagcggc
agtatggacaaccgaatcaaagtctgggaccttattcagggtgaagtggtcagcacatat
aatgctcactcgaagccagtcacttgtgtgtcctgcaatccatccgatgactccctcttc
ctctcatgtggccaggatggtcgtttgttgctttgggacaggaggaaacccaccaaacca
gcctctagattagtctcagacgtagagcccagctgttgtcctacatcagtagcctggcat
ccccaccacaggaccacaatcgcctacggtgacgagctgggacgagtgacactgaaggac
tttcagggagcagagcctggccagacacagagcacccacagccgcagggtctccggccta
gccttctcatcacacagtgcccccttgcttgcctcaatcagtgatgactgtactgttgct
gtgatgaactctgcgcttaaggaaacgttgagagacaagaggcaccaggactttgttcgg
ggtgtctgctgggcccctggcggttctgacacactgaccactgtgggctgggaccaccag
gtcctccaccacgtcacgggacaggatggacccgccactggatactccacgtccccactg
tag

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