Oncorhynchus nerka (sockeye salmon): 115139766
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Entry
115139766 CDS
T07952
Name
(RefSeq) ubiquitin-protein ligase E3B-like isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115139766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115139766
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115139766
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115139766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
115139766
NCBI-ProteinID:
XP_029533375
LinkDB
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Position
LG13:39804719..39825138
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDLLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHIYTITPESMTTIQTHDLLRKFILFLSCEEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENARGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLGQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagtttctggacaaagccaggcaggcacgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagcgctggtc
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatctatttttaaaattgcacggaaa
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggctctttct
aaagacctcaccatcccttggatcaagcagattaaagatctcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgactttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccagaccctca
cttaccaagggcacactcacagcagtattcacactggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctcctcatccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtccatgaccaccatccagacccacgacctg
ttgaggaagttcatcctgttccttagctgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctt
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagttgcagtacctgtggggcatgcctgtgatccggactctcttcagtgatgtcctcagc
aaaaagctggagacccaagagcccacgcctccgccacaacctaccacatcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtacgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgactgcaaatccttact
ggcctaacctacctggatgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaaa
cagctgctagccatgctcatgctgttttgtgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaggagcttgtaaccatc
tcctcatttctcaacacgtttgtttacaagatggtctgggatggcatcttggagaatgcc
aggggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctaaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccggctctcaacctctttaagaccaccagtggcaatgagaggctgtacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgctcgga
aaagccatgtatgagggtatcgtggtagatgtacccttcgcctccttcttcctcggccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatt
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccagagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagatctggatgacctcaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcctctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtccgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcatccacctgcttcaacctgctcaagctgcct
aactacagcaagaaaagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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