Oncorhynchus nerka (sockeye salmon): 115139770
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Entry
115139770 CDS
T07952
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4-like
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115139770
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115139770
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115139770
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
115139770
NCBI-ProteinID:
XP_029533382
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Position
LG13:complement(40063456..40089284)
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AA seq
885 aa
AA seq
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MNENRSPATLLRRCRIAMTETDTPPSAANKTALFSGSGEGGGSGEGQPDADGTCPDLSAL
ADLFESEEGSQSPQDPAPDIDRPGQLQPGDGRQNLRMKFHGAFKKGISNPMDLLESTIYE
SPVAPGPKKAPMDSLFDYGTYRHTNNKKPRRKKLPRGKTETSCNESLDPPGLDPPKVLKV
FNRVLLFDGVSRADPEALSGLLEYLQGHEKRLTDEEFKEPSTGKTCLPKALLNLYSGQND
TIPMLMDIAEQTVNLHEFINTPFRDVYYRGQTALHIAIERRCKQYVELLVEKGADVHAQA
RGRFFQPRDEGGYFYFGELPLSLAACTNQPNMVHYLTENAHKKADLRRQDSRGNTVLHGL
VHIADNTRDNTRFLTKMYDLLLTKCAKLYPECSLEDILNNDGMSPLMMAAKLGKIGVFQH
IIRREIKDEEARHLSRKFKDWAYGPVYSSLYDLSSLDTCGEEVSVLEILVYNSRIENRHE
MLAVEPINELLRAKWQKFAAVTFYISVVSYLVTMIIFTLVAYYRPSQGTPPYPYTNSTDY
LRLGGEVITLGSGVFFFLTNIKDLFLKKCPGVNSLFVDGSFQLLYFIYSLLVIVTAALYL
SGIEAYVSVMVFALVLGWMNTLYFTRGLKLTGTYSIMIQKILFKDLFRFLLVYVLFMIGY
SSALVSLLAVCPGPDEVCPEEGGCPTYPQCRDTDTFSNFLLDLFKLTIGMGDLDMVSSAQ
YPAVFLILLVTYIILTFVLLLNMLIALMGETVSQVSKESKKIWKLQWATTILDIERSFPV
CLRKSFRSGEMVTVGKNWDGTPDRRWCFRVDEVNWCHWNQNLAIINEDPGKNITETQQCP
GTVHQTVRGLRRDRWSTVVPRVVEQNKGPRPRDLVLEMEPLTPRH
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagaaccgctcccctgccactctactgagaaggtgccgcatcgccatgacagag
acggacacgcctccctcggctgcaaacaagactgccctgttctcgggctcaggggaggga
ggaggaagtggcgagggacagcctgatgccgatggtacctgtcctgatctgtcggcactg
gccgacctgtttgagagtgaggagggctcccagtcacctcaggacccggctccggacatc
gaccggccaggccagctgcagccaggggacggccgacaaaacctccgcatgaagttccac
ggtgcctttaagaagggcatctctaaccccatggacctgctggagtcgaccatctacgag
tcacccgtggcgcccggccccaagaaagcccccatggactctctctttgactatggtacc
tacaggcacaccaacaacaagaagccacgcaggaagaagctcccgcgaggtaagactgag
acgtcctgcaatgaaagtctggaccctccgggcttggacccacccaaggtgttgaaggtg
tttaaccgcgtgctgctcttcgatggcgtgtcacgggccgacccagaggccctctccggc
ctgctggagtacctacagggtcacgaaaagaggctcaccgacgaggagttcaaagaacct
tctacagggaagacatgcctgcctaaagcccttctgaacctgtacagtggtcagaatgac
accattcctatgctgatggacatcgcagagcagacagtcaacctccatgagttcatcaac
acgcccttcagagacgtctactacagagggcagacggcgctccacatcgccattgagagg
cgctgtaagcagtacgtggagctgctggtggagaaaggggcagatgttcacgcccaggcc
cgcggacgcttctttcaacccagggacgaggggggctacttctactttggcgagctgcct
ctgtcgctggcagcgtgcaccaaccagccgaacatggtgcactacttgaccgagaacgcc
cataagaaggctgaccttcgacggcaggactcgcgcggcaacacagtgctacacggcctg
gtgcacatcgccgacaacacccgggacaacacccgtttcctcaccaagatgtacgacctg
ctgctgaccaagtgtgccaaactctacccagaatgcagcctggaggacattctcaacaac
gatggcatgtcgccccttatgatggcagcgaagctgggaaaaattggggttttccagcac
atcattcgcagggagatcaaggacgaggaagcgcgtcacctctcacggaagttcaaggac
tgggcgtacggccccgtgtactcctccctgtacgacctctcctcgctggacacctgtgga
gaggaggtgtccgtgctggagatcctggtctacaacagccgcatcgagaatcgccatgag
atgctggctgtggagcccatcaacgagctgttgagggccaagtggcagaagtttgctgcc
gtcaccttttacatcagcgttgtctcctacctggtgaccatgatcatcttcaccctggtg
gcctactaccgcccatcccagggaacgcctccgtacccttacaccaactccacagactat
ctgcgtctgggaggggaggttatcaccttgggctccggagtcttcttctttctcaccaac
attaaggacctcttcctgaagaaatgccccggggtgaactccctatttgtcgacggctcc
tttcaactgctctacttcatctactctttgctggtgatagtgactgcggccctctacctg
tcgggtatcgaggcctatgtgtctgtgatggtgtttgcgctggtcctgggctggatgaac
actttatacttcactagaggcctgaagctcaccggcacctacagcatcatgatacagaag
attctcttcaaagacctgttccggtttctgctcgtctacgtgctcttcatgattggatac
tcgtcagctctggtgtccctcctggcggtgtgccccgggcctgacgaggtgtgtccggag
gaaggcggctgccccacctacccccagtgccgggacacggacaccttcagcaacttcctg
ctggacctgttcaagctgaccatcggaatgggtgatctggacatggtcagcagcgcccag
tacccagctgtcttcctcatcctgctggtcacctacatcatcctcaccttcgtgctgctg
ctcaacatgttgatcgctctgatgggagagacagtgagccaggtgtccaaggagagcaag
aagatctggaagctgcagtgggctacgacaatcctggacatcgagcgctccttccctgtg
tgtctgcggaagtccttccggtccggggagatggtgacagtggggaagaactgggacggt
acccctgaccgccgctggtgcttcagggtggacgaggtcaactggtgccactggaatcag
aacctggccataatcaacgaagacccgggcaagaacataacagagacccagcaatgccct
ggtacagtgcatcaaaccgtccgtggcctgaggagagatcgctggtccacggtggtgcca
cgggttgtggagcagaataaagggccacgaccacgagacctagtactggagatggagcca
ctgacccccagacactga
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