Oncorhynchus nerka (sockeye salmon): 115139801
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Entry
115139801 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139801
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115139801
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115139801
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115139801
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115139801
NCBI-ProteinID:
XP_029533459
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All DBs
Position
LG13:complement(41179663..41189277)
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AA seq
482 aa
AA seq
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MHVSPRKMKMDAIAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAAYSCPRQ
RNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRILNERQ
QQTGEAEALARVYSSSLTNGLNTLNHEIGGTYANGHVIELPKGQVNGGAPGGYYHGMDST
QPSPDQSGLDMAGMKHIKQEPVYDLTPVTNLYNYSSYQDSQLAPSNVSMGELDRIAQNII
KSHLETCQYTADELQQLAWQTHSYDDIKMYQSKTRDMLWQQCAIQITHAIQYVVEFAKRI
SGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGCDDLVS
AVFDFAKSLCSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYFALQHIMQKNH
MDEDTLAKLIGRIPTLSALCTLHTEELQAFQQLHPETVNVLFPPLYKELFNPDPNAAITI
PK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtgtctccgcggaaaatgaaaatggatgccatagcccaaatcgaagttatacca
tgcaaaatttgtggagacaagtcatcaggaatccactatggagtcatcacatgtgagggc
tgcaaagggttcttcagacgtagtcagcagaacaacgccgcatactcctgccctcgccag
aggaactgtctgatcgacaggaccaaccgaaaccgctgccaacactgccgcttacagaag
tgtctcgcactcggaatgtccagagatgcggtgaagtttggccgcatgtcaaagaagcag
cgagacagcctgtacgccgaggtgcagaagcaccagcagcggatcctgaatgagcggcag
cagcagactggagaggccgaggccctggcgcgcgtctactcctccagcctgaccaacggc
cttaacaccctcaaccacgagatcggcggcacctacgccaatggccacgttatcgagctt
cccaagggccaggtgaacggtggtgcccccggcggctactaccacggtatggactccacc
cagccctccccggatcagtcaggcctggacatggcgggcatgaagcacataaaacaggag
cctgtctacgacctgacccctgtgaccaacctgtacaactacagctcctaccaggacagt
cagctggcgccaagcaatgtcagcatgggagagctagatcgtatcgcccagaacattata
aagtctcacctggagacctgtcaatacacagcagatgagctccagcagctggcctggcaa
acacactcctatgatgacatcaagatgtaccagagcaaaacgcgagacatgctgtggcag
cagtgtgccatccagatcacacatgccatccagtatgtggtggagtttgccaagcgcatt
tccggcttcatggagctgtgccagaatgaccagatccttctgctcaagtcaggttgtctg
gaggtggtcctggttagaatgtgtcgggcgtttaacccactcaacaacacagtgctattt
gaggggaagtacgggggcatgcagatgttcaaagctctaggctgtgacgatctggtcagc
gcggtgtttgactttgccaagagtctgtgctctctgcagctcactgaggaggaaatcgct
ctgttctccgcagcagtgctcatctccacagaccggccgtggctgatggagcccaggaag
gtgcagaagctccaggagaagatctactttgcgctgcagcacatcatgcagaagaaccac
atggatgaggacacgctggctaagctgattggtcggatccccacgctgtcggccctgtgt
actctccataccgaggagctacaggccttccagcagcttcatcccgagacggtcaatgtg
ctcttccccccactctacaaggagctcttcaatcccgaccccaatgcagccatcaccata
cccaagtga
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