Oncorhynchus nerka (sockeye salmon): 115139810
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Entry
115139810 CDS
T07952
Name
(RefSeq) transmembrane channel-like protein 2-B
KO
K21988
transmembrane channel-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
115139810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115139810
03037 Cilium and associated proteins [BR:
one03037
]
115139810
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115139810
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115139810
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2207_C
Na_K-ATPase
Motif
Other DBs
NCBI-GeneID:
115139810
NCBI-ProteinID:
XP_029533472
LinkDB
All DBs
Position
LG13:complement(41607384..41633879)
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AA seq
956 aa
AA seq
DB search
MPSQKKNDIAIRMEDVGIEIDGELDSGSEDEARWRDRNRKAKASPRAGGRNGKPATTEDE
EEEEDQDEAPRKRARKKKASAQDSEEEEEEDDRSVKRKGAKAAGRKKKAVKEESEEEEEE
EEERGKKKKGGKVTGKKQKDEQNKEKKGDAKGKGGKEKGNGKDKKKKNGKYSSSSSGESG
DEDSLSEGEMASLKEEVEEKKKLIATLRNKPWRMKRRLKLLKECQSFVEEFEGALGKGKG
RKLYAYKVMMAKKMIKFNRDFDNFKTACIPWERKIKEVESHFGSSVASYFIFLRWMYGLN
LVLFAFMFGLVVLPEVMMGLPYGSIPRKTVPRAEQDRAMDISVLLDFGGYCKYSILFYGF
YNDERTIGVLQFRLPLSYLLVGVGIFGYSLIVVIRTMARNSDEGGDGGDDGQFTFAFKMF
TSWDYLIGNPETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLANFLILCSLGG
SGFLIYFVVKRSQEFANLDQDELSWFEKNEVEFVMSLLGLVCPPLFETIAELEEYHPRIA
LKWQLGRIFALFLGNLYTFLFALFDEVNAKLEKEKSIRNATIWGLNEYYSNYSSYHNTTD
IPPPDIHPADVIRGPCWETAVGIEFVKLTVSDIQVTYMTILIGDFLRAMIVRFLNYCWCW
DLEAGFPSYGEFDISGNVLGLIFNQGMIWMGAFYAPGLVGLNVLRLLTSMYYQCWAVMSC
NVPHERVFKASKSNNFYMGLLLLVLFLSLLPVVYTIMTLPPSFDCGPFSGREQMYHVVME
TIENDLPAFIGNIFTYATNPGLILPAVLLMVLAIYYLNATSKNYQNANLELKKKMQMARD
EEKNRRNNKENTNQVMQDLEDLLPNRSLLPPAAAEEKPPPEIVSEKGSKSPKVAKRPGAA
ANGKGVNIQKDVSLAAPNPKAAVTHPPGPRGPSGNARGPPPGPARGRGRGTPPSRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcagaagaaaaatgacattgcaattagaatggaagatgtgggaatcgaaatc
gatggagagttagacagtgggagtgaggatgaggccaggtggagggacagaaacaggaaa
gccaaagcctctccacgagccgggggacggaacggcaaaccggccaccactgaggacgaa
gaggaagaggaggatcaggacgaggcaccgaggaagagggctcgtaagaagaaagccagt
gcccaggacagcgaggaagaggaggaggaagacgacagaagcgtcaagcggaagggcgca
aaggctgcgggcagaaagaaaaaggcagtcaaggaggagagtgaggaggaggaggaggag
gaggaggaacgagggaagaaaaagaaaggcggaaaagtgactggcaagaagcagaaagac
gagcagaacaaggaaaagaagggcgatgccaaaggcaaaggagggaaggagaaagggaac
gggaaagacaagaaaaagaagaatggaaagtacagcagctcttcttcaggcgagtcaggg
gacgaggattctctgtcggagggggagatggcttctctgaaggaggaggtggaggagaag
aagaagctgatagccacgctcaggaacaaaccgtggcgcatgaagaggaggctcaaactc
ctcaaagaatgccagtcgtttgtggaggagttcgagggggctctgggaaagggcaaaggg
aggaagctctatgcctacaaagtcatgatggctaagaaaatgatcaagttcaaccgtgac
tttgacaatttcaaaacagcctgtattccgtgggaaagaaagataaaagaggttgaaagt
cactttgggtcatctgtggcttcctacttcatcttcttgcggtggatgtacggtttaaac
ttggtcctgtttgcgttcatgtttggtcttgtggttctcccagaggtgatgatgggtctt
ccgtatgggtctattcccagaaaaactgttcccagagcagagcaggacagagccatggac
atctccgtcctccttgattttggtggttactgcaagtactctattctgttctatggtttc
tataatgacgagcgcaccatcggagtcctccagttcagactgcctctctcctacctacta
gttggtgtaggcatcttcggctacagcctgatagtggtcattagaacgatggcccgtaac
tcggacgagggaggagacggtggggatgacggacagttcacctttgcatttaagatgttc
accagctgggattacctcattggcaacccagagacagccgacaacaagtacgcctcaatc
accaccagctttaaggaatccatagtagacgaacaggagaaccagaaggatgagaacatc
cacttgcgaaggttcctgcgggttctagccaactttttaatcctctgcagcctggggggc
agcggcttcctcatctattttgtggtcaagaggtctcaggagtttgccaacctagatcag
gatgagctttcctggtttgaaaagaatgaggtggagtttgtgatgtcactgctggggctg
gtgtgcccccctctctttgagaccatcgctgagctggaggagtaccaccctcgtatcgcc
ctcaagtggcaactgggccgcatcttcgccctgttcctcgggaacctctacacctttctg
ttcgccctttttgacgaagtcaacgcaaagttggaaaaggagaagtctattaggaatgcc
actatctggggactgaatgagtactattccaactatagctcctaccacaacactactgac
atcccccctccagacatccaccctgctgatgtcatcagagggccgtgctgggagaccgcc
gttggcatagagtttgtgaagctcaccgtctctgacatccaggtgacgtatatgaccatc
ctgattggtgacttcctgcgagccatgatcgtgcgtttcctcaactactgctggtgctgg
gacctggaggctggatttccgtcgtatggagaatttgacatcagcggcaacgtgcttgga
ttaatattcaatcaaggaatgatttggatgggtgcattctacgcccctggcctggtaggg
ttgaacgtcctgcgtctcctcacatccatgtattaccagtgctgggcagtgatgagctgt
aacgttccccatgagagggtcttcaaggcctctaaatctaacaacttctacatgggcctc
ctcctcctggtgctcttcctcagccttctgcctgtggtttacaccataatgaccctgccg
ccctccttcgactgtggccccttcagcggaagggagcaaatgtatcatgtcgtcatggag
actatagagaacgacctaccagcattcattgggaatatcttcacctacgcaactaatcct
gggctgatcttaccagcagtgctgctgatggtgttggccatctactatctgaatgcgacc
tctaaaaactatcaaaatgccaacctggaactgaagaagaagatgcaaatggctagagat
gaggagaagaacaggaggaacaacaaggagaacaccaaccaggtgatgcaggacctggag
gacctcctgcccaaccgctctctgctcccacctgctgctgcggaggagaagcccccacca
gaaatagtgagcgagaagggaagcaaatctcccaaagtggcaaaacgtccaggagcagca
gccaatggcaagggggttaatattcagaaggatgtttcgttggctgcaccaaaccccaaa
gcagctgtgacccatcccccaggcccaagggggccgtctggaaacgccagaggaccaccc
ccagggccggcgaggggcagagggagggggacacctccctctagacgctaa
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