Oncorhynchus nerka (sockeye salmon): 115139849
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Entry
115139849 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: SH2 domain-containing protein 3C-like
KO
K23690
SH2 domain-containing protein 3C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115139849
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
115139849
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SH2
RasGEF
DUF7145
Motif
Other DBs
NCBI-GeneID:
115139849
NCBI-ProteinID:
XP_029533537
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All DBs
Position
LG13:complement(43325961..43339818)
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AA seq
919 aa
AA seq
DB search
MSKRKLSLKWFGSLSNLSIRRSSDPKITSKPDGSHSDKTLGASSVDDMDNCLHSPGYARS
SDMYTHVGTVARKERQKSSKGSKKKSSSKGQISGGQSQCQDGDYVRDSPLLSVLSSTHLS
ALEKSLPGGLTGKTLPVVQAPTHSPSPSCDTDTLPSRKGSHEVPKSSALNKPSGNQDPPL
TCEDHSRVNAARTNACVPDPATMPSSQSTQYYSDPVSPTALTKDLYEVMDPIAQAVRRDT
EEKTQDDGSRTLGDSQRMGTFDCQLDPIESKGEYVKFSKERFWLDVPSEKLRRELEEELK
LSSSNLLSHGWYHGHIPWEVSETLVLHHGDFLIRDSLSSLEDYVLTNRWNHHTLHFLISK
VLLQTSETYTRVQYTLEGEAFDSVPALVHFYVGNRMVLTQQSGAQIHSPVNRTLPLHYLE
AAFPLANHKGYLNSPSCQKGALVKTQSGNGMDKICPLSPSTVHHREAVRSCSFNMGQIEK
IHQPSSPIGENLLSSPFITQQPRSPRVIRVPEVAPSPSVSRCYSSSTQPSPSPSPNNNTQ
QTTRAQASPTHIYLTPDTDSSYSQLCPATPPAQSYVKRLCTEEEEDEGQSVVDPVKEENV
YEVPIVETASAFMPSRYQSPLMPKENRPLEVGVLRRVKELLAQVDAKTVAKHITKADCMV
ARILNVTPEMQRKMGVSSGMELLTLPHGHQLRLDLLERFQTMSIMLAVEVLGCTGSTEER
ASLLHKTIQMAAELKSNLGNMFGFAAIMRTLELPQICRLEQTWMVLRQRHTEGAILYEKT
LKPFMKRMNDGKESCAFSNTSFPHVVPLLSLLEKSVAVVDGAEPWETVEAGMDVVMSHLA
AARTMAQLGGNYCTNAEKKLQGFQEQAEVLELFLTEFQMRLLWGSRGAGENQAERYTKFD
QVLTALSNKLEPPIRHSDL
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacgaaaactgagtctcaagtggtttggaagtctctccaatctctccatccgc
cgttcgtcagaccccaagataacctcgaagcctgatgggagccacagtgacaaaactttg
ggggccagctcagttgatgacatggataactgcttacacagcccgggctatgctcgctcc
agtgacatgtacacacacgtaggtaccgtggctcgaaaggagaggcagaaaagcagcaag
gggtcaaagaaaaaaagtagtagcaaaggtcagatcagtggagggcagagccagtgtcag
gatggggactatgtacgagattctcctcttctgagtgtcctgtctagtacccatctttca
gctttagagaagtcattgcctggtggccttacagggaaaacactgccagtggttcaggcc
cccactcactctccctcacccagctgtgacacagatacactgccatcccgtaaaggctca
catgaagtacccaagtcctcagcacttaataaaccctcaggaaatcaagatccaccattg
acatgtgaggaccactcaagggtcaatgcagccaggaccaatgcttgtgtgcctgaccct
gccactatgccttcctcccagagcactcagtactactctgacccagtgtcacccacagcg
cttaccaaggacttgtatgaggtgatggaccctatagcacaggcggtccgcagagataca
gaggagaagacacaagatgatggaagcaggactctgggagattcacagaggatggggaca
tttgactgccaattggatcccattgaaagcaaaggcgaatatgtgaagttctccaaggag
aggttctggttggacgtcccgtctgagaagctgcgcagggagctggaggaagagctgaaa
ctaagcagcagcaacctgttgagccatggctggtaccatggacacatcccctgggaggtg
tcagagactctggtgttgcaccatggggacttcctcatccgagactctctctccagcctg
gaagactatgtgctgaccaaccgctggaaccaccataccctgcacttcctaataagcaag
gtcctgcttcagaccagtgagacctacacccgggtccagtacacactggagggagaggcc
ttcgactccgtgcctgctttggttcacttctacgtggggaacaggatggttttgactcag
cagagtggggctcagatccacagtcccgttaatcgtactttaccactacactacttggag
gcagccttccctctggccaaccacaagggctatctgaactctccctcctgtcagaaaggg
gctctggtcaagacccagagtgggaatgggatggacaagatctgcccgcttagcccttct
actgttcaccacagggaggcggtcaggagctgtagcttcaatatgggtcagattgagaaa
atccatcaaccctcttcacctattggagagaaccttctctcttcaccatttatcacccag
cagcccaggagtccacgtgtcatccgagtgccagaggtggctccctccccatctgtctct
agatgctacagcagcagcacccaaccctcaccctcaccctcacccaacaacaacacacaa
cagaccaccagagcccaggcctcaccaacccacatatatctgactccagacacagacagc
agctacagtcagctctgtcctgccaccccaccagctcagagttatgtgaagcggctgtgt
acggaggaggaggaggatgagggacagagtgttgtagaccctgtgaaggaggagaatgtg
tatgaggtccctatagtggaaacagcctctgccttcatgcctagtaggtaccagtcccca
ctgatgcccaaggagaacaggcccctggaggtgggggtgctgaggagggtcaaggagctg
ctagctcaggtggatgccaagacagtggctaaacacatcaccaaggctgactgcatggtc
gccagaatattgaacgtgactccggagatgcagaggaagatgggtgtaagttctgggatg
gagctactgaccctcccacacggtcaccaactccgtctggacctgctggaaaggttccag
accatgtccatcatgctagctgtggaggtgctgggctgtacaggcagcactgaggagaga
gcttccctactgcacaaaaccatccaaatggctgctgagctcaagagcaacctgggaaac
atgtttggcttcgccgccattatgagaaccttagagctgccacagatctgccgtctggag
cagacgtggatggtgttacgccagcgacacacagagggcgctatcctctatgagaaaacc
ttgaagcctttcatgaagcgcatgaacgatgggaaagagagctgtgcattctctaacaca
tctttcccgcacgtggtgcccctcctatccctcctggagaaaagtgtggcggtggtggac
ggggcggagccttgggagacggtggaagcggggatggatgtggtgatgagtcatctggcg
gcggcacgtaccatggcacagctggggggcaactactgcaccaacgcagagaaaaagcta
cagggtttccaagagcaagctgaggttctagaactcttcctcacagagttccagatgaga
ttgctgtgggggagtcggggggcgggggagaaccaggcagagcgatacaccaagtttgac
caggtgttgaccgccctgtccaacaaactggagccccccattaggcacagtgacctttaa
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