Oncorhynchus nerka (sockeye salmon): 115139901
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Entry
115139901 CDS
T07952
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03013
Nucleocytoplasmic transport
one03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115139901 (gle1)
03015 mRNA surveillance pathway
115139901 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115139901 (gle1)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115139901 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
115139901
NCBI-ProteinID:
XP_029533620
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All DBs
Position
LG13:44996672..45004452
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AA seq
722 aa
AA seq
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MPAESLRWDTLEALKNSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASTDPSTGLSEEAPVSSTSPFPSANAQPTPLSSPLLVPRLKKDTEQIVG
DEDSAPDASNNLSPVTNPIPSPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQELQ
EKLVASVASRESEQLKRFEELMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHKNRIK
ILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPSP
DLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQE
KRKKQQEEEEEHRKMAMLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQDS
ANQCAQSFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGRS
VVSGGQSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPKV
GDFILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIRL
YAAMIQLRWPYGSKQGPDPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMKQ
YQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHFW
RS
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaaactcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctcattgggctctgcttccactgacccaagcacaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacagagcagattgttggt
gatgaggacagtgccccagatgccagcaacaatctcagtccagtcaccaaccccattcct
tctcccaccatctcactgctgtctcccagggcaactcaaatggaaggatgtatacgcatt
tgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctgcag
gagaagctggtggcctcagttgcaagtcgtgagtcagagcagctcaaacgctttgaggag
ttgatggagctgaagcagagacaggagtaccagagtatgagggacatgatggacagagaa
acacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaagaacagaataaag
atcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggcggaatttgag
aggcagagacaggtggagggtagggagagactgcgtgctctcaatgccatccaggaagag
atacttcaactcaatcagctcctggagccagccgcacccacccagtcaggcccctcccct
gatctcacatcctatagcacccgtgctaaccagctatgctcccaggtgtcagaggtggtg
cgcatgacagcggagggggagttccccagtgtggaggatatgacggtggcagagcgggca
ctgcatgagatgaggtcactgatccgggtgatgcaagaggcggctgcccaggcccaggag
aagaggaagaagcagcaggaggaggaagaggaacacaggaagatggcaatgctgcaggcc
cagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaaaag
ggcctgcagaccaaagctgagcagagcaccctgaagtggtaccaagagctgcaggactcc
gctaaccagtgtgcacagtcttttgaaggcttgaacaacactaaggatattcagacaaag
aaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagtatc
tcaggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggagatca
gtggtatccggagggcagtctgtctccacctcccagcatcccaacggcctggactttgtc
agctacaaactggccgagaagtttgtgaaacaaggagaggaggaggtggcgtcccaccac
gaggcagccttccccatcgctgtggtggcctctggggtgtgggagcttcaccccaaagtc
ggagacttcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactaccca
cctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtggaa
gatggaggggtggaagctcaggacagctttttgaagaggatgtcaggaatgatccgcctc
tatgctgctatgatacagctcagatggccttatggctccaagcaagggcctgacccacat
gggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggcagac
gtcacggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgaagcag
tatcaggttcagttttggaagctcattctgctcatccaagaggagtacttgccaaggatt
gaagctgtcaccagccaaggccaggcgggctcagtcacgaggctcaagcagttcctggag
agttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttctgg
agatcctga
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