Oncorhynchus nerka (sockeye salmon): 115139922
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Entry
115139922 CDS
T07952
Symbol
cux2
Name
(RefSeq) homeobox protein cut-like 2 isoform X1
KO
K09313
homeobox protein cut-like
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139922 (cux2)
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain CUT
115139922 (cux2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUT
Homeodomain
Homeobox_KN
DUF3095
Motif
Other DBs
NCBI-GeneID:
115139922
NCBI-ProteinID:
XP_029533655
LinkDB
All DBs
Position
LG13:45362608..45484329
Genome browser
AA seq
1554 aa
AA seq
DB search
MAADVGSMFQYWKKFNLRRLQRELNSIASELAGRQEESEHSHKHLVELSREFKRNVPEEV
REMVAPVLKTFQAQVVALNKRSKEAESAFLGIYKQLIEAPDPVPVLEATHTLEERLQQLQ
SSAPNSEALVREISGHWKRHLECLDKPGDTEEDPAAAESGPGEASSWTAGVMTPNSKQAL
RVTGSPQQNHQGQNQTEGEAEDTDATLADRLGEAEERIKVLHSSLSTAQTDLLDLRCKYD
QEKANKAEEVGVIMMNLEKANQKAEMAQREVERLKEQLASPRSATPGSCHPPDGTSGERG
DVLPSKLEAKLMAKDREILRLLENVQRLQFALQEVQNISANQIIELESQLTYKTEAIERL
EAKLQSQLDYEEIKTELRILKVMKLASTNGSSSQDTAEALLRDKEAFLPSPKYLMDKARI
LHNNDEDRSEESGRESDREWGRPSGSFSSVSQVDERTSASPGPPTMDVSSSSHDLPHPFS
VSPCLRDRLSADHIVHKQLLSSPLFKKESGSPLMAFPTALYAAKVTLMSANQGPAGAGGI
EAGLPSDQSESGSSTAGDDDQLETAEIAFQVKEQLLKHNIGQRVFGHYVLGLSQGSVSEI
LARPKPWRKLTVKGKEPFIKMKQFLSDDQNILALRTIQVRQRGSITPRIRTPETGSDDAI
KNILEQAKKEIQSQRGGVSGTGDIKSSLGSPSGLSSNGAGGSSDDTIKNILEQARREMQA
QQQALMEMDVCGRASATSAGPQVERLGLPEPSKVLPLPTFIKQEEGGTVTVCMANPISSP
QTPLSVLSPAAFVQNIIRKVKSEIGEAGTYFDQHWSVERGPIGMVGGVGGGSSRPFTSVS
PSLSSSSSSGPSALPRPWPRLENGECLPNSEEASAAEEDTGSGMVRSVEVKVESDVSVSG
ESPGPGRGLSYYPSYLPRTLKPTVPPLTPEQYEMYMYHEVDTIELTRQVKEKLAKNGICQ
RIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLLDQLGQALTQLPSQSLS
RDKSPVTAQSSPSPPPSPEESHPSPLVEPVSHTLESSKENQQPDGLGLMPPHPEGGKSTP
SLLSLHQPHTPLGIQELVAMSPELDTYAITKKVKEVLTDNNLGQRLFGESILGLTQGSVS
DLLSRPKPWHKLSLKGREPFVRMQLWLNDPHNVDKLRDMKKMEKKAYLKRRYGLLSTGSD
SDSPSARSECVSPALASIDLCPYSQVKKPRVVLGAEEKEALRKAYLLEPYPSQHTIEMLA
CQLNLKTNTVINWFHNYSRSRMRREVLMEGLQDNDTDTEHHSYSPSAIQSPISDGDERRL
LHPAGRTPHPIRPLSANTPLPHVKQEASEREDEGEEEERNGYIKQPKIQCFSMGVQFPQL
KTEHEDLMGGCRELHLAPHYPQSMRQEEGMSSQAQGLFQEALSLDGPQRTSHSRHEVDDS
SKSPVDPVRFKASSEPSRSSLEVSLNSPSAASSPGLMMSVSPVSSSSAPISPSLPNPPTT
STNHSLDPNPMPPIQSPKPNRSVQRRTEKIANLNNIIHRLERAANREETLEWEF
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgatgtgggatcgatgtttcaatattggaagaaatttaatctacggcggctt
cagagggagctaaactcaatagcgtctgagctggcggggcgacaggaagagagcgagcac
tcccacaagcacctggtggagctgagccgggagttcaagagaaatgttccggaggaagtc
cgggagatggtggctcctgtcctcaagactttccaagctcaggtggtcgctctgaacaag
cgcagtaaggaggcagagtcggcattcctgggaatctacaagcagcttatcgaagcccct
gacccagttcccgttcttgaggccacacacaccctggaggagaggctgcagcagctgcag
agttctgccccaaacagcgaggccctggtcagggagatcagcgggcactggaagagacac
ctggagtgccttgacaagccaggagacacagaggaggacccagcagcagcagagtcagga
cctggggaggcatcgagctggacagctggtgtgatgactccaaacagcaaacaggccctc
agagtcacaggctcacctcagcagaaccaccagggccagaaccagacagaaggggaagcc
gaagacacagatgccactctggccgacagactgggtgaggccgaggagaggatcaaagtg
ctgcattcatctctgagcacagcccagacagatcttctggacctgcggtgtaaatacgac
caggagaaggccaacaaggcggaggaggttggtgtgatcatgatgaatcttgagaaggca
aaccagaaagcagaaatggcccagagggaggtggagaggctaaaggaacaactggccagt
ccccggagcgccaccccagggagctgccatccaccagacggcactagtggggagaggggt
gatgtgttgccatccaagttggaggctaagctgatggctaaagaccgagagatcctcagg
ctactggaaaacgtacagagactacagttcgcactacaggaagtccaaaacatctcagcc
aatcagatcattgagctggaaagccagctgacctataagacagaagctattgagagatta
gaagctaaactgcaatcccagttggactatgaagagattaaaacagaactccgtatcttg
aaggtaatgaagctggcctcaacgaatggtagctcgtcccaggacactgcagaggctctt
ttgcgggacaaagaggcctttcttccctctcccaagtacctgatggataaggccagaatc
ttacacaacaatgatgaggaccgatcagaggagtcaggcagggagtcagacagggagtgg
ggcaggccctcagggtccttctcctcagtctcccaagtggatgagcgtacctctgccagc
cctggaccccccacaatggacgtctcctcctctagccacgacctcccccaccccttctct
gtgtccccctgcttaagggacaggctgtctgcggaccacatcgtccacaagcagctcctc
tcctccccactctttaagaaggaatccggcagccccctcatggccttccccaccgccctg
tatgcagccaaagtcaccctaatgtcagccaatcagggacctgcaggggccggcggcatc
gaggccggcctgcccagtgaccaatcggaaagcgggagctccactgcgggcgatgacgac
cagttggagacagcagagattgccttccaggtgaaagagcagctgctgaagcacaacatt
ggccagcgtgtgtttggtcactatgtgctgggcctatcacagggctcggtcagtgagata
ctggcccgacccaagccctggaggaagctgacagtgaaaggcaaggagcccttcatcaag
atgaaacagttcctgtctgacgatcagaacatcttggccctcaggaccatccaggtccga
cagagagggagcatcactcctcgcatccgaactcctgaaactgggtcagacgacgccatc
aaaaatatcttggagcaggccaagaaggagatccagtcccagagaggaggtgtgtctgga
acaggtgacattaagtcgtccctgggcagcccctccggcttgagcagtaatggggcgggc
ggcagctcagacgacaccatcaagaacatcctggagcaggccaggagggagatgcaggcg
cagcagcaggccctgatggagatggatgtctgtggcagggcctctgccaccagcgccggg
ccccaggtggagcgcctggggctccctgagccttccaaggtcctgcctttacccaccttc
atcaaacaggaggaggggggcactgtgaccgtgtgcatggccaaccccatcagcagcccc
cagacccccctcagtgtcctctcccccgccgcctttgtccagaacatcatccgtaaagtc
aagtcggagatcggtgaggcggggacttacttcgaccagcactggtctgtggagcggggg
cccataggcatggtaggtggcgtagggggcggcagctctcggcccttcacctcagtgtct
ccctccctgtcctcctcctcgtcttcgggcccctcggccctgccccggccctggccccgg
ctggagaacggagagtgtctgcccaacagtgaggaggcgtctgcagccgaggaggacact
ggctcggggatggtacggtctgtggaagtaaaagtggagtcggacgtgtcagtgagtggg
gagtcacccggccctggtcgtggcctgtcctattacccatcatacctcccccgcaccctg
aagcccaccgtgccgccgctgacgccggagcagtatgagatgtacatgtaccatgaggtg
gacaccatcgaactcacccggcaggtcaaagagaagctggctaagaacggcatctgtcag
aggatctttggtgaaaaggtgctgggtctgtctcagggcagtgtgagtgacatgctgtct
cggcccaaaccctggagcaagctgacccagaaaggcagggaacccttcatccgcatgcag
ctgtggctgctggaccagctgggccaagcactcacccagcttcccagccaaagcctctct
cgagataaaagcccagtgacggcccagtcgtcgccctccccaccccccagcccagaggag
agccaccccagcccattggtggagcccgtcagccataccctggagagcagcaaagagaac
cagcagcctgatggcctgggcctaatgcccccccacccagaaggagggaaatccaccccc
agtctgctgtccctccaccagccccacacccccctgggcatccaggagctggtggcaatg
tccccagagctggacacatacgccatcaccaagaaggtcaaggaggtgctaacagacaac
aacctaggccagcggctgtttggggagagtatactgggcctcacccagggctcagtgtca
gacctgctctccaggcccaagccctggcacaaactcagcctcaaaggcagggagcctttc
gtccgcatgcaactgtggctcaacgacccgcacaacgtggacaagctgagggacatgaag
aagatggagaagaaagcctacctgaagaggcggtatgggctgctgagtaccggctcagac
agtgactctcccagtgcccgctctgagtgtgtgagcccagctctggcctcaatagacctg
tgtccctacagtcaggtgaagaagcccagggtggtgctgggggctgaggagaaggaggct
ctgaggaaggcctacctcctggagccatacccctcccagcacaccattgagatgctggcc
tgccagctcaacctcaaaaccaataccgtcatcaactggttccacaactacagcaggtcc
aggatgcgacgggaggtcctcatggagggtctccaggacaacgacacagacacagaacac
cacagctactctccctcggccatacagagccccatctcagacggagatgagaggaggctg
ctgcaccccgctggacgcaccccccaccccatccgccccctcagtgccaacacaccactg
cctcatgtcaaacaggaggccagtgagcgggaggacgagggagaggaggaggagaggaac
ggctacatcaaacagcctaagatccagtgtttctctatgggtgtccagttccctcagttg
aaaacggagcatgaggacctaatgggtggctgccgagagctccacctggctccacactat
cctcagagcatgaggcaggaagagggtatgagcagccaggctcaggggctcttccaggag
gcgctctccctagatggtccccagagaaccagccattccaggcacgaggttgacgactcc
agcaagtctcccgtggacccggtcagattcaaggcctcgtctgagccctcccgcagcagc
ctggaggtctcactcaactccccctccgctgcctcctcgcccggcctcatgatgtccgtc
tcccctgtctcatcttcctctgcacccatctccccatccctgcccaacccacccacgaca
agcaccaaccacagcctggaccctaaccccatgcctcccatccagagccccaagcccaac
aggagcgttcagagacgcaccgagaaaattgccaacctcaacaacatcatccacaggctg
gagagagcggctaaccgagaggagaccctggagtgggagttttag
DBGET
integrated database retrieval system
