Oncorhynchus nerka (sockeye salmon): 115139957
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Entry
115139957 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115139957
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115139957
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115139957
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115139957
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
115139957
NCBI-ProteinID:
XP_029533726
LinkDB
All DBs
Position
LG13:complement(46384045..46462572)
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AA seq
653 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDAQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFTGTTLWSPTSGAGSNNIQHNNISAGSGQAKVEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNFTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKSPEDVVRRYTEKVKVAPDEDCTICMERLVTSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGTKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDKGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVVEENLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agcgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatgcccagctggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggccccggggaagggtgtggtgtgggagtgggagaatgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagtatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcttccaacgccatcctggcc
tctcagcgtcgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctc
aatgtggtacggcagagtaacactttcaccgggaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagtt
gaacaggtgcagtcgcccctgtctagttccaacttcccttgttccccggccctgccgtcc
cttccgcttgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaatgggcagaacaacctgaaccggccaggaacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttcactggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgctgctggcctgcct
gtgtgtctgacccgggcccctaaacccatcctgcacccaccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaagcccagaggatgtggtgcggagatacacggagaaagtgaaggttgcccct
gatgaggactgcaccatctgcatggagaggctggtgacgtcatcgggctacgagggcgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaccaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcccggctacctggaggccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgctagaggcttcccacggcactgctacctcccagacaatgacaagggcaggaaggtc
ctaaagcttctgatcatggcgtgggaccgccgcctcatctttaccatcgacacgtccagc
accaccggcgagtcagacacggtggtgtggaacgagatccaccacaagacagagtttggc
tccaacctgacagggcacggctacccagaccccaactacctggacaacgtcctgacagag
ctgtcagcccagggggtcgtggaggagaacctgaaggactga
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