Oncorhynchus nerka (sockeye salmon): 115139960
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Entry
115139960 CDS
T07952
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115139960 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115139960 (ncor2)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
115139960 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF4820
DnaT
Motif
Other DBs
NCBI-GeneID:
115139960
NCBI-ProteinID:
XP_029533733
LinkDB
All DBs
Position
LG13:complement(46650009..46779317)
Genome browser
AA seq
2448 aa
AA seq
DB search
MSSHPQSVPQGRRAVDTRHLPNPASLPLQLARAHTDVGLADYHPHSRDYSSHLAQPHRRR
PSLLSEFQPGNERGQEQHIRYEHIYLPDPNSLSEVEYAEMKRPRLDMGAESLMRHSAHRP
QLPLGGAEDMSKDRGSSMGKLEPISPVSPAQMDPDLDLVPARFSKEELIQNMDRVDREIT
MVEQQICKLRKKQQQLEEEAAKPQEPERSMISPPPSEAKHRSLVQIIYDENRKKAEEAHW
ILEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFCQRYD
QLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGGGLAS
SSARSEHEVSEIIDGISEQENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDPMKVY
KDRQVMNMWSEQEKATFREKFIQHPKNFGLIASFLERKTVAESVLFYYLTKKNENYKNIV
RRNYRRRGRSQHGQQQQQQLQVNRSSQEEKEKEKEKEEKEREKEKEKEKEKEGEKDEEKT
EGEDKEDVMKDDTSGEDGEDKEPTVAFKGRRTANSQGRRKGRVTRSMTSEVEETATPPLS
SELANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQK
LDEILQQHKMKSERERKARRKGKALQSEEASAPSAAEEEEMEGSGASGNEEEAPEDGEGG
ANNSSDTESLPSPRSSEDSKAKEEGGGRAKAGSKPGDKEASGSPMVQGGDEKPPGDGDKA
IKQEVKTEAGEGSKELPSESTDGDRKPPTAEAEESKSSSKSSKRDHEPKTGSHADSDSSA
TCSADEVEESENTEKNRMTSPNRPSLLNYAHDGVISSPLQKPMDLKQLKQRAAAIPPIMP
QIPEGGPRVGVGKAVLPPHALALYQQQITMAHGESSQEAKQQQHAGQPSKQHPYPAHGDR
DPHNISSPRVRPRSPSTSDKDELEGNERWLQTLLHGLHKSRAFSPHGDPKKQAVGPEDLR
ATTLGRPVMSPYPMSPRDMAKLSHDQHLLHYNSSFQQVGHSGPPGLQQDGIRLAAVRPLH
MPEPPPLISSNKPGGSITQGTPVQLHSPAHGMDHGKMPPAQMGLSWMDQRKVGESKCLEW
VQHSQPWFAGPYPVVKQEQLSPRCSSSQAENLSTQGAPHDSNAGRGSMPAVQGGSITKGI
PGTRVHQDSPISYRGGSITQGTPADVLYKGTITRLITEDNPSRAERERDEALSKGHVVYE
GISGHILTYDRLPSQNPKEDGRGQPGEILGLKRPYDVMEGGISRGLPMRDSLSAANCEGL
MGRAMPHERDSPHPTHHIRGSISQGIPRHLEPQDGYMRREPKQMKREGSPPRGPSQMADP
MKGRDSMVPTVKEGGRSIHLIPREELRQMPEGMMMAKAGKDGIIAQGAPMKQEQGGLRKG
HDVRSIIASSPRSHYGMPPHLEMRGPEQRGRYEEGPKGRPSAVVSTASSMARSSPLAMGG
DQGGKAHHSPVGYEEHKGGMRAPYTGPSHRGSPLSRESGQRQHEGSNKNQPQERKSTPTP
REMSSGKSPLSGVAEQQAQQQAQQQASLASYERLLQGLGADVYRGQIPLAFDPAALRQGI
PIDPAAYYLPRHLAPNPGYPHPYPYLIRGFPDTAALENRQTLLNDYITSQQMHQWPAAAA
MAAQRSDLLRGLSPRDQPLQLPYSAAPRGSSGSPMDRITYIPGAFPSQPYTSSPISPVGP
QHMSKQHGTPSSADRERERDRERDRERERERDRERDREQERERERDRERQRDRDRERERE
RDRDREKGISHGNVEHAPIWRPGTEHSSGGSVRPSSHSGYGHQHSPVSPRTQDSVQQRPS
VLHNTGGKSLPVSDHNNPSVLRSMPGSNRYPGYAYQQSMDSKEMSRDGGKSRGGLPKHTQ
DQHGPSISSSKSDPKLASPNQGGYPSPYPQGSSASHHSGRPPHLLPPQSDSAAGRGESGT
PSREKTQNKPMSVQEQELRALGKTTMTAANFINAIIMRQISCETGMPETGSLVANSASDV
QQKIMPMEQHGLYRPPSEERLSPGQQPQSPLVKGSQRVVTLAQHISEVITKDYTRQSQQA
QQQVPMQQSYHSNSVLDLTRPPSAPQAPPASQEPSQGPRYTPEGTGGDRARDRSPPQPKV
SPVNMSTDGIEPVSPAGAMSEPETQGASYPNEQGMGSRSPPSTSQPPAFFSKLTESTSAI
VKSKKQEMIKKMTVVGSDADFNPGQPGTEIFNMPASTTAGPVSIRSHPAPEVSGNTIGLE
AIIRKALMGKYDEQAEERPPSSNAINPMVASVPAAMLPTDGRTEDSYSLQGGGKPKGSGR
SNGRKAKSPGPGLSGGERPSSVSSVHSEGDANRRTPVTNRVWEDRPSSTGATPFPCNPLT
MRFPSGMPVSNPSPTPSGQIGAQGQGRSWEEEPKPLLCSQYETLSDSE
NT seq
7347 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcccacccccagtctgtgcctcagggccggagggctgtggacacccgccacctg
ccaaaccctgccagtctaccactgcagctggcacgggcacacacggatgtgggattggcg
gactatcacccccactctcgggactacagctcccacctggctcagccccaccgccgcaga
ccctctctactgtccgagttccagccagggaatgagagaggtcaggagcaacacatccgc
tatgagcacatatacctgcccgatcccaacagcctatcagaggtggaatatgctgagatg
aagcgtcctcggctggacatgggggcggagtctctcatgaggcactcagcccaccgccca
caacttcctctgggaggggcagaggacatgtcaaaggaccggggcagctccatggggaag
ctggagccaatctcccccgtcagcccggcccagatggaccctgatctggacctggtgccc
gctcgcttctccaaggaggagctcatccagaacatggatcgtgtggaccgggagattaca
atggtggagcaacagatctgcaagctacgcaagaaacagcaacagctggaggaggaggca
gcaaagccccaggagccggagcggtccatgatctcccctccgcccagcgaggccaagcac
cgtagcctggtgcagattatctacgacgaaaacaggaaaaaggcagaggaagctcactgg
attctggaaggactgggaccccgagtagaactgcctctgtacaaccagccctccgatacc
aagcagtaccatgagaacatcaaaataaaccaggcgatgaggaagaagctcattctttac
ttcaagaggagaaaccatgctcgtaagcagtgggaacagaagttctgccagcgctatgac
cagttgatggaggcctgggagaagaaggtggagcgcattgagaacaacccccggcgccgg
gccaaggagagcaaggtgcgcgagtactacgagaaacagttccctgagatccgcaagcag
agggagctgcaggagcgcatgcagagccgggtggggcagcgtggagggggattggcctcg
tcttcagcccgcagtgaacacgaggtctctgagatcatcgacggcatatcagagcaagag
aacaccgagaagcaaatgcgtcagctggcggtcatccctcccatgctatttgacgcagag
cagcaacgtatcaagttcatcaacatgaacggcctgatggacgaccccatgaaggtgtac
aaggaccggcaggtcatgaacatgtggagcgagcaggagaaggccaccttccgtgagaag
ttcatccagcacccaaaaaactttggcctgattgcttctttcctggagagaaagacggtg
gcagagagcgtcctcttctactacctgaccaaaaagaacgagaactacaagaacattgtg
cgcaggaactatcggcgccgtggcaggagccagcatggccagcagcagcaacaacaactg
caggtgaaccgcagcagccaggaggagaaggagaaggagaaggaaaaggaggagaaggag
agggagaaggagaaggagaaggagaaagagaaggagggagagaaggatgaggagaagact
gagggggaagacaaggaggatgtaatgaaggacgacacctccggcgaggacggggaggac
aaagagcccacggtggctttcaagggtcgacgcacggccaacagccagggccggcgcaag
ggccgcgtcacccgctccatgaccagcgaggtggaggagaccgccactccaccgctcagc
agcgaactcgccaatctggagatgaatgagagctctcgctggactgaagaggagatggaa
accgccaaaaaaggtcttctccagtatggtaggaattggtcagccatcgccaagatggtt
ggctccaaaactgtgtcacagtgcaagaacttctacttcaactacaagaaaaggcagaaa
ctggatgagattctgcagcagcataaaatgaaatcggagagagagcgtaaggcgcggcgt
aaaggcaaagccctacaaagtgaagaggccagtgccccgtctgctgccgaggaagaggag
atggagggttccggggccagcggcaacgaggaggaagctcccgaggatggagaaggtggg
gctaacaacagctcagacacagagagcctgccctctccgcgttcctctgaggacagcaag
gctaaagaggagggtggcggtagggccaaggctggctccaaacctggggacaaggaggcc
tcaggctcccccatggtccagggaggagatgaaaagcccccaggagatggggacaaggcc
atcaagcaggaggtgaagactgaagcaggggagggtagcaaggagctacccagtgaatcc
acagacggagacagaaagccccccactgcagaggcagaggagagcaagagctcctccaag
agctccaagagggaccacgagcccaagactggctcccatgcagacagtgactctagcgcc
acctgcagcgctgatgaggtggaggagtcggagaacacagagaagaacaggatgacgtcc
ccaaaccggcccagccttctaaactatgctcatgatggggtcatctcctcccccctgcag
aagcccatggacctgaagcagctcaaacagagggctgcggccatcccccctattatgccc
cagatcccggagggtggcccgcgggttggggttggtaaggccgtgctgccccctcatgcc
ctggctctctaccagcagcagatcaccatggcccacggagagtcctcccaggaggccaag
cagcagcagcatgcaggtcagcccagcaaacagcacccttacccagcgcatggtgacaga
gacccccacaacatcagcagcccccgtgtccgcccacgcagcccctccaccagcgacaag
gacgagctggaaggcaacgagaggtggctgcagactctacttcacggattacataagtcc
cgggccttctctcctcacggagaccctaagaagcaggcggtggggccagaggacctgagg
gccactaccctgggccggcctgtcatgtccccctacccaatgtcccctcgagacatggcc
aagctcagccacgatcaacacctgctccactataactcatctttccagcaggttggccac
tctggaccccctggtctgcagcaggatggcatcaggttggcagcggtgcgccccctccac
atgccagagccaccccctctcatctcctccaacaagccaggggggtctatcacacaggga
accccagtgcagcttcatagcccggctcacgggatggaccatgggaagatgccccctgca
cagatgggtttgtcctggatggatcagaggaaagtgggtgagtccaagtgtctggagtgg
gtgcagcattcccagccttggtttgctggtccctaccctgtggtgaagcaggagcagctg
tccccgcggtgctcgtcctcccaggcagagaacctgtccacgcagggggcgccccacgac
tccaacgctggacgtgggtccatgccagcggtgcaggggggcagcatcacgaagggcatc
cctgggaccagagttcaccaggactcccccatctcctaccgaggaggctccatcacccag
ggcaccccggccgacgttctgtacaaggggaccataacccgtctgatcacggaagacaat
cccagcagggcagagagggagcgggacgaggccctgtccaaaggacacgtggtctatgag
ggcatcagcggacacatcctcacctatgaccgcctaccctctcagaaccctaaagaagac
ggccggggccagcctggggagatcttggggctgaagcgcccctatgatgtcatggaggga
gggatctccagggggctgcccatgagggactctctgtctgcagccaactgtgagggtctg
atgggtagagccatgccccatgagagagacagcccacacccgacccaccacatccgtggt
tccatttcacagggtatcccccgtcacctggaaccccaggatggctacatgaggcgagag
cccaagcagatgaagagagagggctccccgccccgagggcctagccagatggctgacccc
atgaagggccgagacagcatggtgcccaccgtgaaggaggggggccgatccatccacctc
attcccagagaggagctccgacagatgcccgaaggcatgatgatggccaaggctggcaaa
gatggcatcatagcacagggtgctccaatgaagcaggagcagggtggcttaaggaagggg
catgacgttcgttccatcatcgccagctccccgcgctcccactacggcatgccccctcac
ctggagatgcgggggcctgagcagcggggccgctacgaggaaggtcctaagggtcggccc
agcgctgtggtcagcacggccagctccatggcccgctcctcgcctctggccatggggggc
gatcagggtggcaaggcccaccacagccccgttggctacgaggaacacaagggtggcatg
agggctccctacactggtccttctcacagaggatccccgctgtccagagaatcaggccag
cggcagcatgaaggctccaataagaatcagcctcaggagcgcaagtccacacccacccct
agggagatgagctccggcaagtcaccgctgtcgggcgttgccgagcagcaggcccaacaa
caggcccaacaacaggcatccctggcgtcgtacgagcgtctgctgcagggtctgggggct
gacgtgtaccgaggtcagatccccctggcctttgaccctgctgccctgcgtcagggcatc
cccatcgacccagcagcctactacctgcctcgtcacctggcccctaaccctggctaccct
cacccctacccctacctgatccggggcttccccgacacggcggcactggagaaccgccag
acgctgctcaacgactacatcacctcccagcagatgcaccagtggcctgcagccgccgcc
atggctgcccagcgctcagacctgctgagggggctctcaccacgggaccagcccctccaa
ctgccctactctgctgccccgcgcgggtcttccggctcccccatggaccgcatcacctac
atccctggagccttccctagccagccatacacctcctctcccatctcaccagttgggccc
caacacatgagcaagcagcacggcacaccatcctctgctgaccgcgagcgggagagagac
cgggagagagaccgcgagagggagcgggagagagaccgcgagagggaccgggaacaggag
agagagagagagagggatcgcgagagacaacgagacagagacagagagcgggagagagag
cgggacagggacagagaaaaggggatctctcacggcaacgtggaacacgcccccatctgg
agaccaggcacagagcacagctcaggtggtagtgtcaggccgtcctcccactctggctat
ggccaccagcactccccggtgtcccctcgcacccaggacagtgtccagcagaggcccagc
gtcctgcacaacactgggggcaagagtctgcctgtcagcgaccacaacaacccctctgtg
ctaaggtccatgccaggctcaaatcgctacccaggctacgcctaccaacaaagcatggac
tctaaggaaatgagccgggatgggggcaagagtaggggaggccttcccaaacacacccaa
gaccaacatgggccctctatatcctccagcaaatctgaccccaagctggccagccctaac
caagggggttaccccagcccctacccccagggctcttcagcctctcaccactcagggcga
ccccctcacctgctgcccccccagtcggatagcgctgctggccgcggagaaagtggcaca
cctagtagggaaaagactcaaaacaaaccgatgtccgttcaggaacaagagctccgagca
ctcggtaagaccaccatgactgcggccaacttcataaacgcgattatcatgcgtcaaatt
tcttgtgaaacggggatgccagagacgggctcgctcgtggccaacagcgccagtgatgtt
caacagaagataatgcccatggagcagcacggtctgtaccggcctccctctgaggagagg
ctgtccccgggccagcagccccagtcccccctggtcaaaggcagccagagggtggtcacc
ctggcccagcacatcagtgaggtgatcaccaaggactacacccggcagagccagcaggcc
cagcagcaggtccctatgcagcagtcttaccatagcaactctgtcctggacctgacccgg
ccccccagcgccccccaggccccacctgcctcccaggagcccagccaggggcctcgctac
actccagagggaaccggcggggatcgtgcccgagacaggtcccctcctcagcccaaggtg
tcacctgtcaatatgtctacagacggcattgagcccgtgtcccctgccggagccatgtct
gaaccagagacacaaggggcctcctaccccaacgagcagggcatgggctctcgctcccct
cccagcacctcccagcccccagccttcttcagcaagctcactgagagcacctcggccatc
gtcaagtccaagaaacaggagatgatcaagaagatgaccgtggtcggcagtgacgccgac
ttcaatcctggtcagccaggaacagagattttcaacatgcctgcctctaccactgcagga
cctgtgagtatacgcagccacccggctcccgaggtgtccggtaacaccatagggctggag
gccattatcagaaaggccctgatgggaaagtatgatgaacaggccgaggagcgccctccc
tcctccaatgctattaaccccatggttgccagtgtgcctgccgctatgctccccactgat
ggacggacggaggactcttactcactgcaaggtggggggaaaccaaagggcagcgggcgt
tctaacgggcggaaggccaaatcccccgggccgggcctgtcagggggggagagaccctcc
tctgtgtcctctgtccactctgagggggatgccaaccgccgcacgcctgtcaccaaccgt
gtctgggaggaccggccctcctccacaggcgcaacacccttcccatgtaaccccctgacc
atgcgtttcccaagtggcatgccggtgtcaaacccctcccccaccccctctggacagata
ggggctcagggccagggccggtcctgggaggaggagcccaagcccctgctgtgttctcag
tatgagaccctgtctgacagtgagtga
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integrated database retrieval system
