Oncorhynchus nerka (sockeye salmon): 115139975
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Entry
115139975 CDS
T07952
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115139975 (adamts13)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
115139975 (adamts13)
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
115139975 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Adt-1
Reprolysin_5
Reprolysin_4
TSP1_spondin
TSP1_CCN
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
115139975
NCBI-ProteinID:
XP_029533773
LinkDB
All DBs
Position
LG13:complement(47731761..47745643)
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AA seq
1555 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSATSVPEFQLIWTDC
ASTELHTGPWRCSFETEGKRFVLGLGERKQSFSCQSTLETARNTTLNTTRKSHAMCCQQA
KVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEVRNCSSPGTPHLVF
HQPFTARGPPRHSHMKRLRRRRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLTSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVTQLGGACSSQWSCVITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNTDLPVCRVLSCHVKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPNQLSSSSSVVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGTCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGSIALNITHPSPLEDGHLVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGEQTSPNITYHFYTPMSNNAFIKEIPRGKWTVVTTSCSVTCGSGIQKS
MYVCMDEDTKEHLEEVYCNSAPLLLLQQTTCHLPACPPSWEMGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHSATQSVDTCNFQPCPARWNASEAGECSAVCGPGAAKRL
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVVDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLVVPEVYCDASSKPEPHTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWRVLRTGACTMSCDLGLARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSALTHTHTTNTPLLETRDQLISPQGMEVTPMDEEPLLSPTLSLTQTPLTATEPT
TPQTTTAMPTVTPKTSLCGQLLLEESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLS
CKKREYVAFYDRLVLVRKCDQLEDTELTSRTNVLMVRQHLLSPGNGVLLTYSSQKNNKKS
HHQDCDVQLFAPSGVIENPTMTSELGSHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQS
TFIMIRDVDVLKTNVFKGQRLFDWRSAGNMAEIEFHGEYLHSNGSFRAEYSFVEP
NT seq
4668 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctgtcagtgctgccaggctccacagcaatacta
atgagatctccattggaggagctatttctgcactccctggatcaaaaggacatggttttt
tattttggtactgactctgctacttcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctgcacactggcccctggcgatgctccttcgagaccgaagggaagcgc
tttgtgctggggctcggggagaggaagcagtccttctcctgtcagtccacattagagaca
gctcggaacaccactctcaacaccacaaggaaaagtcatgccatgtgttgtcagcaggcc
aaagttctacatcccccttcaactaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagtcagaaactgttccagtccaggaacacctcatctggtgttc
caccagccatttactgccagaggtcctcccagacactctcacatgaagaggctgcgtcgc
cgaaggtcagccataatgcctgaggtgacccacctggagctgctagtggtggtggcgcct
gacgtgcagctggtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggagccaacatgagagtgcatctggtccgc
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcgtct
ctgacgagtgtgtgtgagtgggccagaagggtcatcccctctaatgacactgaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtgacccagctaggcggggcatgttctagccaatggagttgtgtaatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggcataaaccatgatgggattggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgtcctggttggctct
ctgcaagactggaagccaggcctttactatggtgtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaacactgacctgcctgtgtgccgtgttctc
tcctgccacgtcaaacctgatgacaacagctcatgtaaacgtctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccaaac
cagctcagctcctcttcctctgtggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggcgggggcgtcacttcccggaccaggcaatgcaataac
ccacgacctgcatttggtgggaatgattgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacagcctccctctacacctggatccccgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggacgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatggctca
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtaaacgccactcaggttcacattgtcaacagggcacccgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcagcattgcgtta
aacatcactcacccctctcctctggaggacggtcatctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctgcctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggagaacaaaccagtccaaacatc
acctaccacttttatactcccatgagtaataatgcttttataaaagagatacccaggggc
aagtggactgttgtcacaacatcctgctctgtcacctgtggatctggcatacagaaatct
atgtatgtctgtatggatgaagacaccaaggagcatctggaggaggtctactgtaattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagatgggagagtttgggccctgcagtgccttgtgtggtggtggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacactcagccacacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggagtgttcagcggtgtgtgggcccggagcggccaaacgcctt
gtgacatgtgtacggtccgaaggtggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtggtcgatgtctgccctattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagtggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctcacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagagtgctgaggacgggggcctgtactatgtcttgtgatctg
gggttagccaggaggcatgtctcctgtgttgagtatatccatggggaggacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgtgaaagactggaaccagtgttcagtgccgtgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcaccatccggggctgccagatggacgactgc
agggtcttagagaagactagtgccctcacccacacacacaccaccaacacccccttacta
gagaccagggaccagttaatcagtccccagggcatggaagtcactcccatggatgaggag
ccactcctgtctcctactctcagcctgacccagacacccctgactgcaacagaaccgacc
accccacagaccaccacagccatgcccactgtgacacctaaaaccagtctgtgtgggcag
cttctgctggaggagtcaggcacagtggacttgagacatgagacaggtcgctgcatcctg
tcaataggccggcccctggatgaggtcatccacatgaaagtagagtccagctccctaagc
tgcaagaaaagggagtatgtggcgttctatgacaggctggtactggtcaggaagtgtgac
cagcttgaggacactgaactgacctccaggaccaacgtcctgatggtgcgccagcatctc
ttgtcccctggaaacggagtgctgctgacttacagcagtcagaagaacaacaagaagagt
caccaccaggactgtgatgtccagctgtttgctcccagcggggtcattgagaatccaacg
atgacctcagagttgggcagtcacacctgtcgagtcctcatcaacgcccctccctcagtg
aagattaggatccgggctctgagcatgggccctgtggtcaacagcacagcagcccagtcc
accttcattatgatacgagatgtagacgtcttgaagaccaacgtgttcaagggccaacgg
ctttttgactggcgatcagctggaaacatggcagagatagaatttcatggcgagtacctg
catagcaatgggagcttccgagctgaatactcattcgtggagccttga
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integrated database retrieval system
