Oncorhynchus nerka (sockeye salmon): 115139980
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Entry
115139980 CDS
T07952
Name
(RefSeq) LIM/homeobox protein LMX-1.2-like isoform X1
KO
K09371
LIM homeobox transcription factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115139980
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
115139980
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
ABC_tran_2
Motif
Other DBs
NCBI-GeneID:
115139980
NCBI-ProteinID:
XP_029533782
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Position
LG13:complement(48136945..48195099)
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AA seq
396 aa
AA seq
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MDIATGPKSLERCFSKRNHSKYPRMLDGIKIEDNPHRQATLGVMLGTEYHHRSVCEGCQR
PISDRFLMRVNDSSWHEECLQCAVCQQPLTTSCYFRDRKLYCKHDYQQLFAAKCSGCLEK
IAPTEFVMRALECVYHLNCFSCCVCDRQLRKGDEFVLKEGQLLCKSDYEKEKDLLSSVSP
DDSDSEKSDDGDLGIKQEKGTGGQGKGDDGKDPRRPKRPRTILNTQQRRAFKASFEVSSK
PCRKVRETLAAETGLSVRVVQVWFQNQRAKMKKMARRQQQQQEQQNSQRLGQEVMSNRME
GMMNSFTPLAPPQQQLVAMDQNGYSTDPFQQGLTPPQMPGDHMNPYGNDSIFHDIDSDTS
LTSLSDCFMASSEMNMQARVGPIDRLYSMQNSYFAS
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggatattgcaacaggtcccaagtcactagaacgctgtttctcgaagagaaaccattcc
aagtacccaaggatgttagacggtataaagattgaagataatccccatcgtcaagctacc
cttggagtcatgcttgggacagaataccatcaccgatctgtatgtgaaggatgccagcgt
ccaatatctgaccggtttctgatgagagtcaacgattcctcatggcacgaggagtgtttg
cagtgcgctgtgtgtcaacaacctctcactacaagttgttacttccgggataggaaactg
tactgcaaacatgactaccaacaattgtttgccgccaagtgcagtggatgcctggagaag
atcgcccccacagagtttgtgatgcgtgctctggagtgtgtataccacctcaactgcttc
tcctgctgtgtgtgtgaccggcagctgaggaaaggggatgaatttgtcttgaaggagggc
cagctgctgtgtaagagtgactatgagaaggagaaggacctgctcagttctgtcagcccg
gacgactccgactcagagaaaagcgacgatggggatctgggtatcaagcaggagaaaggc
accggaggccagggcaagggagatgatgggaaggaccccagaaggcccaagcgaccccgc
accattctgaacactcagcagagacgagccttcaaagcctccttcgaggtgtcctccaag
ccctgcagaaaggtaagggagaccctagctgctgagacaggcctcagtgttcgtgtggtg
caggtgtggtttcaaaaccagagagccaagatgaagaagatggcaaggagacagcaacag
caacaggaacagcagaattctcaaaggcttggccaagaggtgatgtccaatcggatggag
ggcatgatgaactccttcacgccactggccccgccccagcagcaactggttgccatggat
cagaacggctacagtacagaccccttccagcagggcctcactcccccacagatgcccgga
gaccacatgaacccatatggtaatgattcaattttccatgacatagacagcgacacatct
ttaaccagcctcagtgactgcttcatggcatcttcagaaatgaacatgcaagcacgtgtg
ggacccattgaccgactctattccatgcagaactcttactttgcatcatga
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