Oncorhynchus nerka (sockeye salmon): 115140020
Help
Entry
115140020 CDS
T07952
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00061
Fatty acid biosynthesis
one00071
Fatty acid degradation
one01100
Metabolic pathways
one01212
Fatty acid metabolism
one03320
PPAR signaling pathway
one04146
Peroxisome
one04216
Ferroptosis
one04920
Adipocytokine signaling pathway
Module
one_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
115140020
00071 Fatty acid degradation
115140020
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
115140020
09143 Cell growth and death
04216 Ferroptosis
115140020
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
115140020
03320 PPAR signaling pathway
115140020
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
one01004
]
115140020
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115140020
Enzymes [BR:
one01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
115140020
Lipid biosynthesis proteins [BR:
one01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
115140020
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of breast milk
115140020
Exosomal proteins of breast cancer cells
115140020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115140020
NCBI-ProteinID:
XP_029533870
LinkDB
All DBs
Position
LG13:complement(49831716..49855267)
Genome browser
AA seq
747 aa
AA seq
DB search
MSVDPVLLYRLPCEVFPRSALGLRVSSRVLFGAMHFQEWLQSLHSSGGVWGPVREDFWSL
LPSSSSFSLSSLSRSPSSLLGIGALASLTAYWLVTRRRPMQPPCDLNAQSIAVQGEPNWR
RSALLKDDALLEFYYDDTRTAYDMFQRGLRVAGNGPCLGFRKPGEPYQWISYTEVAEQAQ
VLGSGLLSKGCQPNPQQFVGIFAQNRPEWVISELACYTFSMAVVPLYDTLGEEAMVHILN
LAEISLVICDKEEKAESLLGNKEKGATPTLSCLVLFNDCSDAIVERGKNCGVEILELTQL
MVLGRQNLKDPMPPKPQDLAVVCFTSGTTGKPKGAMITHGNIASNSSSVIKILEGSFFIR
QEDVSISYLPLAHMFERMIQVSMFCHGARVGFYQGDISLLMDDIKTLKPTFFPVVPRLLN
RIYDKILGSVTSRLRRAVLHYAVRRKQAELSSGVVRNNSLWDRLVFNRIQANLGGNLRFI
LTASAPISPTVLSFLRATLGCLIFEGYGQTECTAGCTFSMPGDWSAGHVGAPLPCAMVKL
VDIPDMNYYAKNGEGEICIRGHSVFRGYLKDEEKTAEALDSDGWLHSGDVGQWLLNGTLR
IIDRKKHIFKLSQGEYIAPERIENVYMRCVPVLQVFVHGDSLKSHLIGIVVPDPEVFIDW
VKERGIIGSYKELCQHPDVKKAVLEDMTAMGKEAGLKSFEQLKDLHLHPEMFTVSNGLLT
PTLKSRRVDIRRVFQEQITNMYSTTVI
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttgatcctgtgctgttgtatcggcttccatgcgaagtgttccctcgcagtgca
cttggtttacgggtctcgtcacgtgtattatttggagctatgcattttcaggagtggtta
cagtcccttcactccagtgggggggtttggggacctgtgagggaggacttctggagcctt
ctcccttcgtcatcctctttctccctctcctctctctctcggtccccctcctctctgctg
ggtataggggctctggcctccctcactgcatactggctggtgacccgccgtcggcccatg
cagcccccctgtgatctcaatgcccagtctatcgctgtacagggagagcccaattggagg
cgttcagctttgctcaaggacgatgccctgttggagttctactatgatgacaccaggaca
gcctatgacatgttccagagaggactgagggtggcagggaacggcccatgccttggcttc
aggaaacctggggaaccgtaccagtggatctcctacactgaggtggctgaacaggcacag
gtgctgggctctgggcttttgagcaaaggctgccaaccaaaccctcagcagtttgttgga
atatttgcccagaacagaccagagtgggtcatttcagagctggcctgctacactttctct
atggccgtggtgcccctgtatgacacacttggagaggaggccatggtgcatatcctcaac
ctggcggagatctcactggtgatctgtgacaaggaggagaaggcagagtcccttctgggg
aataaggagaaaggtgcaacacccactctctcctgtctggtgctctttaatgactgcagt
gatgccatagtggagaggggcaagaactgtggagtggagatcctagaactcacacagctc
atggtacttggacgacagaacctcaaagatcctatgccaccaaaaccccaggacctggca
gtcgtgtgcttcaccagtggaaccacaggaaagccgaagggagccatgatcacccacggc
aacatcgcctccaactcctcctctgttattaagatcctggaggggtcattttttattcgg
caagaagacgtgtcaatctcttacttgcctcttgctcacatgtttgagaggatgattcag
gtgtccatgttctgtcatggggccagggtaggattctaccaaggggatatctccctactc
atggacgatattaagactctgaaacccactttctttccagtggtgcctcgcctactcaac
cgcatctacgacaagatcttaggctctgtgacgtcccgattgcgccgggcagtgctgcac
tatgcagtgaggaggaagcaggctgagctcagcagtggggttgtacgtaacaacagtctg
tgggacaggctggtatttaacaggattcaggctaatttaggaggtaatctgaggttcatc
ctgactgcctcggcccccatctcccccaccgtgctctccttcctcagggccaccctcggc
tgtctgatctttgagggttacgggcagactgaatgcacagcaggctgcaccttctccatg
ccaggagactggagtgcaggccatgttggcgctcccctgccctgtgcaatggtgaagttg
gttgacatccctgatatgaactattatgccaagaacggagaaggagagatctgtatccgt
ggccacagtgtgttccggggttacctgaaggatgaggagaaaacagcagaggccctggat
agcgatggctggctgcacagtggagatgtgggccagtggttactgaatgggacacttcgc
atcatagacaggaagaagcatatcttcaagctgtcccagggagagtacatcgcccctgaa
aggattgagaacgtctacatgcgttgtgtccctgtgctacaggtctttgtgcatggtgac
agcttaaagtctcacctgattggtattgttgtgccagacccagaagtgtttattgattgg
gttaaggagaggggaatcattggatcctacaaggagctctgccagcatccagatgtgaag
aaagcagtgttagaagacatgacagccatggggaaggaagctgggctgaagtcttttgag
cagctgaaggacctgcacctgcatccagagatgttcactgtgagcaacggccttctcacc
cccaccctgaagagcagacgagtagacatccgcagggtcttccaggaacagatcacaaac
atgtacagcacaacagtcatctag
DBGET
integrated database retrieval system
