Oncorhynchus nerka (sockeye salmon): 115140124
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Entry
115140124 CDS
T07952
Symbol
usp30
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 30 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
115140124 (usp30)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115140124 (usp30)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140124 (usp30)
04121 Ubiquitin system [BR:
one04121
]
115140124 (usp30)
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115140124 (usp30)
Peptidases and inhibitors [BR:
one01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
115140124 (usp30)
Membrane trafficking [BR:
one04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
115140124 (usp30)
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
115140124 (usp30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUF5700
Motif
Other DBs
NCBI-GeneID:
115140124
NCBI-ProteinID:
XP_029534104
LinkDB
All DBs
Position
LG13:53437419..53448162
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AA seq
503 aa
AA seq
DB search
MPWCRSATSEKLIREFLYSGTIVRNKIMKNWGVIGGIAAAMAAGVYVLWGPITDSKKRKK
GMVPGLLNLGNTCFMNSLLQGLAACPSFVKWLEEFTSRKGVSEDEPEKDPKLSTTLLQLL
QALSNDNTGEDVLDAGRLLEVLRLYRWHISSFEEQDAHELFHVLTSSLEEERDRQPKVTH
LFDIQSLESLPDIDDKTLSCKSRGPLHPLRSPWKFPHPFHGRLTSNMACKRCEQQSPVRY
DSFDSLSLSIPSPQWGWPISLDHCLQHFISSETIKEVECENCTKLQQGTLVNGHVLESQR
TTFIKQLKLGKLPQCLCIHLQRLTWSNEGTPIKRQEHVQISEYLSMDHYKHRATIQRLQV
INCTPKTIKAEDSGEAADKTPPNGKDIEHHNNNKPLSNGTCSSVFLHSPGLNPQVNLTYD
YSSSEYHFQLMAVLVHHGDMNSGHFVTYRRCPPSPHSPSPFSSQWLWVSDDSVRKASLQE
VLSSNAYLLFYERVRRLRLLLEE
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgccgtggtgcagatcagcgacatctgaaaagcttattcgagagttcctgtactctggt
accattgtcaggaataaaattatgaaaaactggggagtcattggtggaatagcggctgcc
atggctgctggagtatatgttctatggggtccaattacagacagcaagaaaaggaagaaa
ggcatggtaccaggcctgctgaacctgggaaacacctgcttcatgaactctctgctccag
ggcctggcagcttgcccttccttcgtcaagtggctggaggagttcactagccgcaaaggt
gtgtcagaggacgagccagagaaggaccccaaactttccacaacactcctgcagcttctc
caagcattgtcaaacgacaacactggggaggatgtgctggatgcagggcgtctgctggag
gtcctcagactctacaggtggcacatcagttcctttgaggaacaggatgcccatgagctc
ttccatgtcctcacctcttccttggaggaggagcgagaccgacagcccaaagtcacccac
ctctttgacattcagtcccttgagagtctcccagatatagatgataagaccttaagctgc
aagagtcgaggccctcttcatcctttacgaagtccttggaagtttccacatcctttccat
ggccgcctaacaagcaatatggcttgcaagcgttgcgaacaacagagtccagtgcgatat
gactctttcgacagcctctccttatccatcccttcaccgcaatggggctggcctatctct
ctggatcactgtctccagcatttcatctcttcagagaccattaaagaggtggagtgtgaa
aactgcaccaagcttcaacaaggcaccttggtgaatgggcatgtcctggaaagccagagg
acaaccttcatcaaacagcttaaactgggaaagctcccacagtgtctctgtattcacctg
cagagactgacatggtctaatgagggtacgcccataaagagacaggaacatgtccagatc
tcagagtacctgtctatggaccactacaaacaccgcgcaaccattcagaggctccaggtc
atcaactgtactcccaaaaccattaaagcagaggattcaggagaagctgcagataagacc
cctcccaatggcaaagatatagaacaccataacaacaacaagcctctgtccaatggaacc
tgttcgtctgtctttctccattctcctgggttgaacccacaggtcaacctcacatatgac
tacagctcctcagaataccactttcaactgatggctgtgttggttcaccatggtgacatg
aactcaggacactttgtgacttaccgccgctgccctccctcgccccacagcccctctcca
ttcagctcccagtggctgtgggtttcagatgactctgtacgcaaggccagtctgcaggag
gtgctgtcctccaacgcctacctactcttttatgagcgggtgagacggctccgtctactg
ttggaggagtag
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