Oncorhynchus nerka (sockeye salmon): 115140125
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Entry
115140125 CDS
T07952
Symbol
ung
Name
(RefSeq) uracil-DNA glycosylase isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115140125 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115140125 (ung)
Enzymes [BR:
one01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
115140125 (ung)
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
115140125 (ung)
Prokaryotic type
115140125 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
115140125
NCBI-ProteinID:
XP_029534108
LinkDB
All DBs
Position
LG13:53450403..53460140
Genome browser
AA seq
306 aa
AA seq
DB search
MLAMNVPYLRRSPIMFLTAPLTATHVSPTLHFAQYTKVGRVKKLKLSGNGTTESPSSPVC
PELLARIAKNKQAALEKLSASNTPDEFGESWRKSLVSEFGKPYFINLMSFVDGERKLNTV
YPPPQHVFTWTRMCDIKDVKVVVLGQDPYHGPNQAHGLCFSVQRPIPPPPSLLNMYKELA
SDIEGFQHPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVVQWLSSNRE
GLVFMLWGAYAQKKGAAIDRKRHHVLPTVHPSPLSAHRGFFGCKHFSKTNELLEKSGKEP
IDWKAL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcaatgaatgtaccatatttgagacgttctccaataatgtttttaactgcacca
ttaacagccacacatgtttcaccaaccttgcattttgctcaatataccaaggttggacgg
gtgaagaagctgaagctatcaggcaacggaacgacggagtcaccttcttctccagtgtgt
ccagaactgctggcccgaatcgccaaaaacaagcaagctgcgttggagaaactgtccgcc
agtaacacaccggatgaatttggggagagttggagaaagagtttggtctctgagtttgga
aagccttatttcataaacttgatgtctttcgttgatggagagaggaaactcaacactgtc
tacccaccccctcagcatgttttcacctggacacggatgtgtgacatcaaagatgtcaag
gttgtagtcctcggtcaggacccatatcacggtccaaaccaagcccatggattatgcttc
agtgtgcagagacctatcccacctccacccagcttgttgaatatgtacaaagaattggcg
tctgatatagagggcttccagcaccctggacatggagatttaactggatgggctaaacaa
ggtgtcttgctgctcaatgctgtgctgaccgtccgagctcaccaggccaactctcacaaa
gacaagggctgggaaactttcactgatgctgtggtgcagtggctcagctccaaccgggag
ggcctcgtcttcatgctgtggggggcctatgctcagaagaagggagcagctattgatagg
aaacgtcaccatgtccttcccactgtacacccctcccctttatctgctcatcgaggcttc
tttggatgcaagcacttttccaagaccaatgagttgttggagaaatcagggaaggagccc
atagactggaaggcactttga
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