Oncorhynchus nerka (sockeye salmon): 115140172
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Entry
115140172 CDS
T07952
Name
(RefSeq) ras GTPase-activating-like protein IQGAP1 isoform X1
KO
K05767
Ras GTPase-activating-like protein IQGAP2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115140172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115140172
04147 Exosome [BR:
one04147
]
115140172
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115140172
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115140172
Exosomal proteins of colorectal cancer cells
115140172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGAP
RasGAP_C
CH
IQ
bZIP_1
SHD1
WW
Motif
Other DBs
NCBI-GeneID:
115140172
NCBI-ProteinID:
XP_029534206
LinkDB
All DBs
Position
LG13:54627957..54724549
Genome browser
AA seq
1682 aa
AA seq
DB search
MYYEEKANSHKPRYGTIQDDERLSAEEMDERRRQNIAYEYLCHLEEAKRWMEACVEEELP
STTDLEEGLRNGVYLGKLAKFFAPKMVSEKKLYDRDQARYKRTGLHFRHTDNTVQWLRAM
ESVGLPKIFYPETTDVYNRKNMPKVVYCIHALSLYLYKRGIAPQIQDLLGKVAFTEEEIS
NMRSELEKYGIQMPTFSKIGGILANELSVDEATLHAAVFAINEAVDKGEAAVTIGTLKNP
NAMLRNTGEDLAQDYQDTLSRAKASKELQASGRRLSIATEERDVYEELLTQQEIQSCVDL
VNMQVAVRQVNQAISAQNEAALLVGLKVLALGLLGVQEANSHWYLEHFTTYCQVQTRVSK
DSGQMVEARLDAGGAVMLEREEIQRVVISCNDFAEAEKRKLEAITAINSAIRHGVAAETI
EELINPEAQLPIVYQTAANLYQTELFSLQIQGPKAGLGHEELSVAVEMLSAVAVLNEVLD
TKEPQAVTEQLSDSPLGFSNMDHDNLHRYADTLISLRADSLSRGLEFLTWNDVQKTIDTV
NLQVHEEHERIIAISEINEALSSDDPNQTLSALLLPTAKLQGVNPATAKHYHDVLQNTKL
IICKVLPLDTEEMSSGDESAVLWLNQIQEGIHTANQDEEEALTLAGAVADINREVAAGDS
QMTLQALQSPLPGLRGVLSECADTYQTQLGQRQDLNVTTAGSSDSVWVKHQIKGGYDYYY
NLENREGTWEEPEDFTHNSTQLRREEIQSVVGGVTAEYNREQLWLANETLVTQLQARVRG
YLVRRAHAERLDFLRQQEPHVVRLQASWKGYKQRKMYKDRMNVLQSNVGTVVKLQSFVKM
WRAKSKYSQRLQYFKDHEKDIVKIQAFLKANKARDDYRTLTGAQDPPLSVVRKFVHLLEQ
SSLDLLEEQEVTRLREEVVTKIRSNQQMEKDLNLMDIKIGLLVKNRITLQDVVSHSKKLT
VKKSKEELAAGDRQGIKALSKDKRKKLEAYQHLFYLLQTNPSYLAKLIFQMPQNKSTKFM
DTVIFTLYNYASNQREEYLLLKLFKTALEEEIKSKVDQIQDIVTGNPTVIKMVVSFNRGA
RGHNTLRQLLAPVVKEIIEDKGLGINTNPVEVYKAWVNQLETNTGEASKLPYEVTPDQAM
SHEEVRAKLESSSRALRTATDKVLNSIVLSLDNIPYGMRYVAKVLKNSLHEKFPDATEDE
LLKIVGNLLYYRYMNPAIVAPDGFDIIDMSAGGQLHSDQRRNLGSVAKMLQHAAANKLFE
GENAHMTPMNNYISQTYQKFRVFFQAACDVPEPEEKFNVDEYSDMVTLCKPVIYISIDEV
INTHSLVLEHLEAISPDHNDLLHELLQDLGDMPDVEALLGEGVVDPNNPNKESTLSQLAK
TQISLSLTNKFELLEGDDKDTKGLMMKTKKLIMDVIRIQPGDTLPETLETPASGLQEREH
AKVVELRAVQDAQAPEGLKSSQAVLEDRQLPLEQKKRKILRNLRTLEQAGLVTTGNKYQD
LINDISKDIRYQRRYRQRRKAELVKLQQTLSALNSKTAFYQDQTNYYDTYIRTCLDNLNR
KNARRSIKLDRKVEEKGSTKWKHQSLKYTAARLHEKGVILEIEGLQTNQFKNVMFDISPS
EEVGDFEVKAKFMGVEMEKVQLHFQDLLQLQYDGVAVMKMFDKAKVNVNLLIFLLNKKFY
GK
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atgtactatgaagaaaaagctaattcacacaagccacgttatggaaccattcaggacgat
gagaggctctcggcggaggagatggacgagaggagacgacagaacatcgcctacgagtat
ctctgtcacctggaggaggccaaacggtggatggaggcgtgtgtagaggaggagctgccc
tccaccacagatctggaggagggtctgaggaacggagtctaccttggaaaactggccaag
ttctttgctcccaagatggtgtctgagaagaagctctatgacagggaccaggctcgctac
aagcgcacaggacttcacttcagacacacagacaacacagtgcaatggctacgggccatg
gagtctgtagggctgcctaagatattctatcctgaaacgacagatgtgtacaatcgcaaa
aacatgcccaaggtggtgtactgcatacacgcgttaagcttatacctgtacaaacggggc
attgccccacagatccaggacctgctggggaaagtggccttcacagaggaggagatcagt
aacatgcggagcgagctggagaaatacggcattcagatgccaaccttcagcaagatagga
ggcatcctggccaacgagctctcggtggacgaggcaaccttgcacgctgctgtgtttgcc
atcaacgaggcggtggataagggtgaggcggctgtgaccatagggacattgaagaacccc
aacgctatgctgaggaacactggggaagatctggcccaggactaccaggacactcttagc
cgggccaaggccagcaaggagctccaggcctcaggcaggcgcttgtccatagccacagag
gagagagatgtttatgaggagctgctgacccagcaagagatccagagctgcgtcgacctt
gttaacatgcaggtggcggtgcggcaggtgaaccaggccatctctgcccagaatgaggct
gcgctgctagttgggctcaaggtgctggccctggggctgctgggggtccaagaggccaac
tctcactggtacctggagcacttcaccacctactgccaagtccagactcgggtcagtaag
gacagtggtcaaatggtggaggcacgtctagacgctggaggtgcagtgatgctggagagg
gaggagattcagagggtggtcatatcctgtaacgactttgctgaggcagagaaacgaaaa
ctggaggccattacagcgatcaactctgccattcgtcatggagtagcagcagagactata
gaggagctgataaacccagaggcccagctccccatagtctaccagactgctgccaacctc
taccagaccgaactgttcagcctgcagatacagggaccaaaggcaggcctggggcatgag
gagctgtctgttgcagtggagatgctgtctgcagtggcggtgctcaacgaggtcctggac
accaaggaaccccaggccgtcactgaacagctttctgactctcctctgggcttcagcaac
atggaccacgacaacctgcacaggtacgcagacactctgatcagcctcagagccgacagt
ctgtcccgcggcctggagttcctcacctggaatgatgttcagaagaccatcgacacagtc
aatctgcaggtccacgaggaacacgagcgtattattgctatatctgagatcaatgaggca
ctgagctctgatgaccctaaccagaccctctctgccctgctcctgcccacggccaaactg
cagggagtcaacccagccacagccaaacactaccacgacgtcctgcagaacaccaagcta
atcatctgcaaggtcttacctctggacacagaggaaatgagctcaggggatgagtctgct
gtgctgtggctcaatcagatccaagaaggcatacacacagccaaccaagatgaagaggag
gctctgacattggctggagcagtggcagacatcaacagggaggtggcagcgggagactcc
caaatgaccctgcaggccctccaatcacccctgccagggctgagaggggttctgtctgag
tgtgcagacacctaccagacacagctgggccagcgccaggacctcaacgttactactgca
ggcagcagtgacagtgtgtgggtgaaacaccagatcaagggaggttatgactactactac
aacctggagaacagagaggggacctgggaggagccagaggacttcacacacaacagcaca
cagctccgcagagaggaaatacagagtgtggttggaggtgtgacagcggagtataacagg
gagcagttatggttggccaacgagaccctggtaactcagctacaggctcgggttagaggt
tacctggtgaggagagctcacgccgagagactggatttcctacgacaacaagaaccacac
gtggtccgactacaggcctcctggaagggctataaacagaggaagatgtacaaagacaga
atgaatgtgctacaaagcaacgtggggactgtcgtcaagcttcagtcgtttgttaaaatg
tggcgagccaaaagtaaatactctcaaagactgcagtatttcaaagaccatgagaaagac
atagtgaagatccaggctttcctcaaggctaacaaagccagagacgactacagaacactc
accggggctcaggaccctcctctgtcggtggtgcgtaagtttgttcacctgctggagcag
agcagcctggacctactggaagaacaggaagtgacacggcttagggaggaagtggtcact
aagattcgctccaatcagcagatggagaaagacctcaacctgatggacattaagattggc
ctgctggtcaagaacaggatcaccctacaggatgtggtttcccatagtaagaagctgacg
gtgaagaagagtaaagaagagctggctgcaggggacaggcagggcatcaaggcactgagc
aaagacaagaggaagaaactagaggcttaccagcacctcttctacctgctgcagaccaac
ccttcgtacctggccaagttaatcttccagatgccccagaacaagtctactaagttcatg
gacacagtgatcttcaccctgtataactatgcctccaaccagagagaggagtacctgctg
ctcaaactcttcaagaccgcactggaggaggagatcaagtccaaggtggatcagatccag
gacattgtgactggaaaccccacggtcatcaagatggtggtgagcttcaaccgtggagcc
cgtggtcacaacacgctgaggcagctgttggcacctgtggtcaaggagatcatcgaggac
aagggcctgggcatcaacaccaaccctgtggaagtgtacaaggcttgggtcaaccagctg
gagaccaacactggagaggccagtaaactgccttacgaggtgaccccggaccaggccatg
tcacacgaggaagtacgtgccaagctggagtcctccagtcgggcgctgcggacagccaca
gacaaagtgctcaactccatcgtgttgtcactggacaacatcccctatggcatgaggtac
gttgcaaaggtcctgaaaaattcacttcatgaaaagttcccagatgctacagaggatgag
ttgttgaagattgtagggaacctgctgtactaccgctacatgaacccagccatagtggct
ccagacggcttcgacatcatagacatgtcagccggaggtcagctccactctgaccagcgt
cgcaacctgggctccgtggcaaagatgctgcagcacgccgccgccaacaagctgttcgag
ggagagaatgcccacatgacccccatgaacaactacatctcccagacctaccagaagttc
agggtgtttttccaggcggcgtgtgacgtccctgagccggaggagaagtttaacgtggat
gagtactctgacatggtgactctgtgcaagcctgtcatctacatctctatagatgaggtc
atcaacacacattcgctagtgttggagcacctggaagcaatctcccccgaccacaacgac
ctgctgcatgagctgttgcaggacctaggagacatgcctgacgtggaggcactgctgggt
gaaggggtggtggatcctaacaatcccaacaaggagagcaccctgagtcagctggcaaag
actcagatctccctcagcctcactaacaagtttgagctgctggaaggcgatgacaaggac
acgaaaggcctgatgatgaaaactaagaagctgataatggatgtaatcaggatccagcca
ggagacactctcccagagaccctggagaccccagcctctggcctccaggagcgtgagcat
gctaaggtggtggagctgcgtgcagtgcaggacgcccaggccccagaggggctgaagagc
agccaggcagtgctggaggacagacagctgcctctagagcagaagaagaggaagatcctc
cgcaatctccgaaccctggagcaggctggcctcgtcaccactggcaacaagtaccaggat
ctcatcaacgacatctccaaggacattcgttaccagaggcgttacagacagaggaggaag
gcagagctagtgaagctccaacagacactgagtgcgctcaactcaaagacagccttctat
caggaccagaccaactactatgacacttacatcaggacctgccttgacaacctcaacagg
aagaacgcgcggcggtccatcaagctggacaggaaggtggaggagaagggcagtacgaag
tggaagcatcagtctctgaagtacacggcggcccggctgcatgagaagggagtgatcctg
gagatagaggggctgcaaaccaaccagttcaaaaatgtcatgtttgacatctcgcccagt
gaggaagttggggactttgaggtgaaggccaagtttatgggagttgagatggaaaaagtc
caactccatttccaggacctgctccaacttcagtacgacggagtggcagtgatgaagatg
tttgacaaggccaaagtcaatgtcaacctgctcatcttcctcctcaacaagaagttctat
ggaaaataa
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integrated database retrieval system
