Oncorhynchus nerka (sockeye salmon): 115140191
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Entry
115140191 CDS
T07952
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1-like isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115140191
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115140191
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
115140191
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Phage_Coat_A
CDC48_2
Motif
Other DBs
NCBI-GeneID:
115140191
NCBI-ProteinID:
XP_029534240
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All DBs
Position
LG13:complement(55163928..55175219)
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AA seq
309 aa
AA seq
DB search
MFSFNMFDHPMPRTFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVVAINYNEKIYELRVMETKPDKAV
SIIECDMNVDFDAPLGYKEPERCYKAPEEPTEEEGDPNTWTEMDMRFRAFTGSGNRLDGK
KKGIEPSPVPIDPSDIKRGIPNYEYKVGRITFIRNSRPLPRKTTEDEDSEFIAFSGEGKS
LRKKGGRKL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttcaacatgtttgaccacccgatgccacggactttccaaaaccgcttctcc
actcaataccgctgctactctgtgtccatgctggcgggtcccaacgaccggtctgatgtg
gagaaaggaggaaaaattataatgccgccatctgcacttgaccaactaagcagacttaac
atcacctaccccatgttgttcaaacttaccaacaagaactccgacagaatgacacactgt
ggtgtcttggagtttgtagcagatgaggggatttgttacctgccacactggatgatgcag
aatctcctgctggaggaagggggcctggtccaggtggagagtgtgaacctcatggtggcc
acatactccaagttccagccacagagcccagacttcctggatatcactaaccccaaagca
gtgttggaaaatgccttgagaaactttgcctgcttaactacaggagatgttgtcgcaatt
aactacaatgaaaagatctatgaactgcgagtgatggagactaagccagacaaggccgta
tctatcattgaatgtgatatgaatgtggactttgatgcgccgcttggttacaaagaacca
gagaggtgttacaaagcaccagaggagcccacagaggaggaaggagaccccaacacttgg
actgaaatggacatgagattcagagctttcacaggttcaggcaatcgcctggatggcaaa
aagaaaggcatcgagcccagccccgtccccatcgatcccagtgacattaaaagagggatt
cctaactatgagtacaaggttggcaggatcaccttcatcagaaactccaggcctctgccc
aggaaaacaacagaggatgaggattcggaattcattgccttctctggtgagggaaagtca
cttcgcaagaagggtggcagaaagctttga
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