Oncorhynchus nerka (sockeye salmon): 115140197
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Entry
115140197 CDS
T07952
Symbol
dhx37
Name
(RefSeq) probable ATP-dependent RNA helicase DHX37
KO
K14780
ATP-dependent RNA helicase DHX37/DHR1 [EC:
5.6.2.6
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115140197 (dhx37)
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
115140197 (dhx37)
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
90S particles
Helicases
115140197 (dhx37)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHX37_C
OB_NTP_bind
HA2_C
DEAD
AAA_22
Helicase_C
HA2_N
AAA_19
nSTAND3
AAA_30
AAA_16
ResIII
ATPase
AAA_25
Flavi_DEAD
TsaE
Motif
Other DBs
NCBI-GeneID:
115140197
NCBI-ProteinID:
XP_029534247
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All DBs
Position
LG13:55297155..55310471
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AA seq
1151 aa
AA seq
DB search
MGRLRKRHNWKGREQNETHPPPEAKEEGKTVVVELKDGGNLKGVDESNALVLPATKPKKK
RGIEKALTKKQPLTKKQRKHLQKVLEVKEKKAKRVDILAKLAEVQLPDSELKLLYTTSKL
GTGDKQYQTKQTPDEVDDGASGPRISSLSGANRKRKRRAREEEKAEEESSDLDSSDEEMD
DGTMGNRSVEATNVSESKEPASSCQEKEVEEIEKKEEKKEMSEESGPARASSKKPSEPAI
FISVDRLPEIQDSRLRLPVLAEEQVIMEAVRENSFVVLCGETGSGKTTQVPQFLYEAGYA
SGTGIIGVTEPRRVAAVSMSHRVAKEMNLSTRLVSYQIRYEGNVTSDTKIKFMTDGVLLK
EIQKDFLLQRYSVIIIDEAHERSVYTDILIGLLSRIVPLRNKKGLPMKLIVMSATLRVED
FTENRKLFPTPPPVIKVEARQFPVSVHFNKRTPLEDYTGEVFHKTCKIHRILPPGGILVF
LTGQAEVHSVCRRLRRAFPLRRGNTATGEGEVAATDSSDEMKKLKKAKHKRTVSLPRIDL
DNYSALPVDEGDEDRLAGIDDEGSDLELGDDAADTEEKADPSLPLYVLPLYSLLAPEQQA
KVFRPPPHGARLCVVATNVAETSLTIPGIKYVVDCGRVKKRFYDRVTGVSSFKVSWTSQA
SANQRAGRSGRTEPGHCYRLYSSAVFGDFSLFSEAEITRRPVEDLVLQMKDLNIDKVVNF
PFPTTPSAEALVAAEQLLVSLGALEEPPRTGRVKEMERARLSCPITPLGRAMASFPVSPR
YAKMLALGKQQDCLPYVIAVVAAMTVREIFEDLDRPAGSEDESSKLAQRRARLAQMRRLW
AGQGASLLLGDLMVLLGAVGACEFAGCTLKFCEENGLRYKAMLEIRRLRGQLTNAVNSVC
PEVGVFVDCKMAPPTESQVVCLRQIVLAGLGDHLARRVQQEELLDPKWRNGYKTPLLDEP
VYIHPSSALFKTLPQFVVYQEVLETTKMYMRGVSAVEPEWVPQLLTQYCHFGSPLETPSP
WLCASTGRVKCHCTSTFFRCGWQLPAIEMDYPDGLERYKLFAKFLLEGQVCPKLKQHSSY
LLSNPSIMMKTWAKLQPRTEALLGALVSERVDCRDVLLSSWKNHDKFLLTAYCQWIPEAK
HQDVAKSWPPI
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atggggcgactgaggaagaggcacaactggaagggacgggagcagaacgagacacatcca
cctccagaggccaaggaggaggggaagactgttgtagtggaactcaaagacgggggcaac
ctaaagggggtggacgagagcaatgccctggtcctcccagccaccaaacccaagaagaag
aggggcattgagaaggcccttactaagaaacagccccttaccaagaaacagaggaaacat
ctacaaaaagtcctggaggtcaaagagaagaaagccaagagagtagacatcctagccaaa
ctggccgaagtgcagctgcctgactctgaactgaagctgctctacaccacctccaaattg
ggcacaggagacaagcagtaccagaccaaacagactcctgatgaggtagatgacggagcc
tcagggcccaggatcagcagcctgagtggagccaacaggaagagaaaacgaagagcacga
gaggaagagaaggcagaagaggagagtagtgatttggactcatctgatgaagagatggat
gacggcacaatggggaatagaagcgtggaggccactaatgtctcagaatctaaagagcca
gcctcctcctgtcaggagaaagaggtggaagagatagagaagaaagaagagaaaaaggag
atgagcgaggagtcaggccctgctcgggcctccagtaaaaaaccatccgagccagcaatc
ttcatctccgtggacagactgccagagatacaggattcccgtctgaggctgccagtgctg
gctgaggagcaagtaatcatggaggcggtgagagagaacagttttgtggttctgtgtgga
gagacgggaagtggtaaaaccacccaggtaccccagttcttgtacgaggctggatatgcc
agtggcactggaatcattggtgtgacagagcctaggagagtggcagcggtcagtatgtcc
cacagagtggccaaagagatgaacctgtctacacggctggtgtcgtaccagatccgttat
gaggggaatgtgaccagtgacaccaagatcaagttcatgacagacggagtcctgctgaag
gagattcagaaggacttcctgctccagaggtacagtgtgatcatcatagatgaggcccat
gagaggagtgtgtacacagacatcctgattggcctgctgtcacgcatcgtaccactcaga
aacaagaaaggcctccccatgaagctgatagtgatgtcagctactctgcgtgtggaggac
ttcacagaaaacaggaagctgtttcctactcctcctcccgtcattaaggtggaggcccgt
cagttccctgtaagcgtccactttaacaaacggactcctctggaggactacactggagag
gtgttccacaagacctgtaagatccaccgcatactgccccctgggggtatcctggtgttc
ctgacgggacaggctgaggtccactctgtctgcaggagactgcggagggccttccctctc
aggaggggcaatacagctactggtgagggagaggtggcagcaacagactcctcagatgag
atgaagaagttaaagaaagccaaacataagagaactgtgtccctgccccgtattgacctg
gataactactcagcgttgccggtggatgagggggatgaggaccgtctggcggggatagat
gatgaggggtcagacctggaactaggagacgatgctgcagacacagaggagaaggcggac
ccgtccctccctctttatgtcctccccctctactctctcctggctccagagcagcaggcc
aaggtgttccggccccctcctcatggtgcacgtctgtgtgttgtggctaccaacgtagca
gaaacctctctaaccatcccggggataaagtatgtggtcgactgcggtcgggtcaagaag
cgcttctacgaccgcgtcacgggggtctcctccttcaaggtctcctggacctcacaggcc
tcagccaatcagagggcaggccggtcaggccgtaccgaacctggacactgctataggctg
tactcatcagcggtgtttggagacttcagtctgttctcagaggcagagatcacccgcagg
ccagttgaggacctggtactacagatgaaggaccttaacatagacaaggtggtcaacttc
ccattccccacaactccctcagctgaggcgctggtggcagcagaacagttactggtttca
ctgggagcactagaggagccgccacgcaccggacgggttaaggagatggagcgagcgcgt
ctgagctgtcccatcacccccttgggcagggcaatggcgtcgttccccgtgtcaccacgc
tacgctaagatgctggcgctagggaagcagcaggactgtctgccttacgtcatcgctgtg
gtggctgccatgacggtccgggagatctttgaggatctggacagacctgctggtagtgag
gatgagagctccaagctggcccagcgtcgagcccggctggcccagatgaggaggctgtgg
gctgggcagggagcctctctactgctgggggacctcatggtcctgctgggtgctgtgggt
gcgtgtgagtttgctggctgcactcttaaattctgtgaggagaatggactgcggtataaa
gccatgctggagatcagacgacttagaggacagctcaccaatgcagtgaactcagtgtgt
ccagaggtgggtgtgtttgtggactgtaagatggctccacctactgagagccaggtggtg
tgtttacgtcagatagtgctggcgggactgggggaccacctcgccagacgggtacagcaa
gaggaacttctagacccaaaatggaggaatggatacaagaccccactcctggatgagcca
gtctacatccacccctcctcagccctgtttaaaacgctacctcagtttgtggtctatcag
gaggtcttggagaccaccaagatgtacatgagaggtgtgtcagcggtagaaccagagtgg
gttccccagctcctcacccagtactgccattttggatctcctctggagaccccgtcgcca
tggctctgtgcctctacaggcagggtcaaatgtcactgtaccagcacctttttccgatgt
ggctggcagcttcctgctatagagatggattacccagatggcctggaacgatacaaactg
tttgccaagtttcttctggaaggacaggtctgccctaaattgaagcagcacagcagttat
cttctctcaaacccttccatcatgatgaagacctgggcaaaactccagcccaggactgag
gctctgctgggagctttagtgtcagagagagtggactgcagagacgtactgctctcatcc
tggaagaaccacgacaaattcctcttgactgcgtactgccagtggatccctgaagctaag
caccaagacgtggccaaaagctggcctcccatctga
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