Oncorhynchus nerka (sockeye salmon): 115140292
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Entry
115140292 CDS
T07952
Symbol
ykt6
Name
(RefSeq) synaptobrevin homolog YKT6 isoform X1
KO
K08516
synaptobrevin homolog YKT6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04130
SNARE interactions in vesicular transport
one04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
115140292 (ykt6)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115140292 (ykt6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140292 (ykt6)
Membrane trafficking [BR:
one04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
115140292 (ykt6)
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
SLM4
Motif
Other DBs
NCBI-GeneID:
115140292
NCBI-ProteinID:
XP_029534458
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All DBs
Position
LG13:62291458..62296619
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AA seq
233 aa
AA seq
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MKLYSLSVLHKGATKSNLLKSAYDLSSFSFFQRSSVQEFMTFTSALIVERSAHGSRASVK
EQEYLCHVYVRNDSLSAVVIADSEYPQRVAFTLLDKVLEEFSRQVDSIDWPSGNPETINY
KALDIHLAKYQNPREADAMTKVQAELDETKIILHNTMESLLERGEKLDDLVQKSEHLGNQ
SKAFYKTDDCANRCIFLSWPKTQQRVSLGKVGALIETKHRHGSRTHAARSCSD
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtacagcctcagcgtcctccacaaaggagcgacaaaatccaacctccttaaa
tctgcctatgacctatcctcctttagcttcttccaacgctccagtgtccaagagttcatg
accttcaccagcgccttgattgtggagcgttctgcacacggcagccgagcctcagtcaaa
gaacaagagtacctgtgccacgtgtatgtgaggaatgacagtctgagtgcagtggtgata
gcagacagcgagtaccctcaaagggtcgccttcacactactagacaaggtgctagaggag
ttctccagacaagtggacagcatagactggccatctggaaaccctgaaaccatcaactac
aaagctctggacatccacctggccaagtaccagaaccccagagaggcagatgctatgacc
aaagtgcaggctgaactggacgagacaaagatcattctgcacaacaccatggagtctctg
ttggaaagaggggagaagctggatgatctggtgcagaagtctgaacacctggggaaccag
tctaaagccttttataagactgatgattgtgcaaatcgttgcatttttctctcgtggcct
aaaactcaacagcgcgtgtcactaggcaaagtaggtgcgctgattgaaactaaacacagg
cacggaagcagaactcatgctgcgaggtcatgtagtgattga
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