Oncorhynchus nerka (sockeye salmon): 115140299
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Entry
115140299 CDS
T07952
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115140299
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115140299
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
115140299
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115140299
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115140299
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
Motif
Other DBs
NCBI-GeneID:
115140299
NCBI-ProteinID:
XP_029534470
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Position
LG13:62526051..62534310
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AA seq
551 aa
AA seq
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MCSESTMLRRWLLALVARVGVIALVVCCCLSLLYLLACKPQSSYSHEQAQVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGVLPMGLEGLHR
PQTHTDLQEFFKAQLSRAEVQSGEKLPSEYAVIPYESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELTGTLEIALQVLNGPRRQGERHRRSYSPSDFIEGLTRTERDKGTVYELMFKGES
SQDFRQLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCIQQEG
KTHLTVVYFGKDQIDEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
MKDAGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRS
LFHLWHEKQCADELQPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHMERQKLLNDSKS
LEVEVAPYPQI
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaatccacaatgctccggaggtggctgttagctctggtggcccgtgttggg
gtcatagcactagtggtgtgctgctgcctgtctctactctacctgctggcctgcaaaccc
cagagcagctacagccatgaacaggcccaggtctgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacaggcactatattaacagtctc
agtaagcagatagctcagctcaaagaggctcttcagatgaggacccagcagctgcaggag
tctctggaaaaggccagggccaaaggggttctacctatggggctggagggtctgcatagg
ccccagacacacaccgacctccaggagttcttcaaggcccaattgagccgggctgaggtc
cagtctggtgagaagttgcccagtgagtacgccgtgattccctacgaaagcttcaccctg
cacagggtgtaccagctcgagatgggtctgacccgtcatccagaggagaggcctgtgagg
aaggaccggagagacgagctgacaggcacgctagagatagccctgcaggtcctcaacgga
ccccggagacaaggggagcgccaccgacgctcctattcaccatcggacttcatagagggg
ctgacccgtacagagcgtgacaaggggacagtgtatgagctgatgtttaagggcgagagt
tcgcaggacttcagacagctggtgttcttcagacccttcggcccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaacatcatagtaccactgtccaggagg
gctgacacattcagacagttcatcaacaacttcagaaaggtgtgcatccagcaggaaggg
aagacgcacctcactgtggtctactttggcaaggaccagattgacgaggtcaaagccatc
atggatcagacatctagggaaacccagttccgaaacttcacgctgatccaactgaatgag
gaattctctcgtgggcggggcttagaggtgggcgcacgggcctggaggcggagccacaac
gtgctgctcttcttttgcgatgtcgacatccactttaccctagacttcctcacatcctgc
agactcaatgcagagcctggtaagaaagtgttctacccagttctcttcagtcagtacaat
ccatctcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
atgaaggatgctggattctggagagattttgggtttggcatgacttgccaatataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctatacagaaagtacctgcacagcaagctgatggtgattcgatctccctcccgtagc
ctcttccacttgtggcatgagaagcaatgcgcggacgagctgcagccagacaagtataag
atgtgtatgcagaccaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcacatggagaggcagaaactactgaacgactcaaagtca
cttgaggtagaggttgccccatacccacagatctaa
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