Oncorhynchus nerka (sockeye salmon): 115140308
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Entry
115140308 CDS
T07952
Name
(RefSeq) histone-lysine N-methyltransferase SMYD1-like isoform X1
KO
K11426
[histone H3]-lysine4/36 N-trimethyltransferase SMYD [EC:
2.1.1.354
2.1.1.357
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115140308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115140308
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.354 [histone H3]-lysine4 N-trimethyltransferase
115140308
2.1.1.357 [histone H3]-lysine36 N-dimethyltransferase
115140308
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
115140308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SET
zf-MYND
Motif
Other DBs
NCBI-GeneID:
115140308
NCBI-ProteinID:
XP_029534483
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All DBs
Position
LG13:complement(62671516..62682943)
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AA seq
495 aa
AA seq
DB search
MDNIEVFDSPGKGRGLRATKELLSGDVLFSEPPFAAVVFDSLADKICHSCFRRQDKLQRC
GQCKFAQYCDKTCQSAGWKEHKLECGAIKAFGAIGDNFGKAPNENIRLAARIMWRLDKEG
GVMSDMQMTSLDDLENHISDMPEDDLKELKVDIHNFLDYWPRNSKQHRVDDISHIFGVIN
CNGFTVSDQRGLNAVGVGLFPNLCLVNHDCWPNCTVILNHGNQSAVNTVYHSQMRIELRA
LGKIEPGEEVTVSYVDFLNVTEDRQRQLKMHYFFDCTCEHCKGHIKDDLKMGGKEVDGVK
VPEEQVKEVTEYSLQMLQKMDKARLEGNYHEVIKICRECMEKQEPVLADTHIYQLRMWST
ASEVSAYLQFIDEAADYARKMVDGYNKLYHPCNAHLGMATMRAGVTHWQAGKIEVGHGMI
CKAYAILQRTHGPTHPITKDLETMRMQTEMELRMFRENEYIYKSMREAALKNQPMNMMNE
PMAESVKNLFRRQKK
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggacaacattgaggtgtttgactcacccggaaaggggaggggccttagagccactaag
gagctgctttccggagacgttcttttctcagaacccccttttgctgcagttgtctttgac
agtcttgcagacaagatctgccacagctgtttccgcaggcaggacaagctgcagcgctgt
ggccagtgtaagttcgcccagtactgtgacaagacatgccagagcgctggctggaaggaa
cacaagctggagtgtggagccatcaaggcttttggggccatcggggacaacttcggcaag
gcacccaatgagaacatccgtttggccgcccgcatcatgtggcgcctcgataaagagggc
ggtgtcatgtcagacatgcagatgacctcattggacgatctggagaaccacatcagtgac
atgccagaggatgatctgaaggagctgaaggtggacatccacaacttcttggactactgg
ccacgcaacagcaagcaacaccgtgtagacgacatctcgcacatctttggagtgatcaac
tgtaatggcttcacagtgagtgaccagagaggtctaaatgctgtgggagtgggtctgttc
cctaacctgtgtctggtcaaccatgactgctggcctaactgcactgtcatcctcaaccat
ggcaatcagtcggctgtgaatactgtgtatcactctcagatgaggattgagctgcgtgcc
ctgggcaagatcgagccgggtgaggaggtgacagtgtcctacgtggatttcctgaacgtg
actgaggacagacagagacagctgaaaatgcattacttctttgactgcacctgtgaacac
tgtaaaggtcacatcaaagacgacctcaagatgggaggcaaggaggtggacggggtcaag
gtacctgaggagcaggtgaaggaggtaacggagtacagtctgcagatgctgcagaagatg
gataaggctcgcttggaggggaactaccatgaggttattaagatatgcagggagtgtatg
gagaaacaggagccagtgttggctgatacacacatctaccagctaaggatgtggagcaca
gccagcgaggtgtcagcctacctgcagtttattgacgaggccgctgactatgcacgcaaa
atggtggacggatacaacaagctataccatccatgcaacgcccacctggggatggcaacc
atgagggcaggagtgacccactggcaggcagggaagatagaggtgggacacggcatgatc
tgtaaagcctatgccatcctgcagagaacacacggacccacacatcccatcaccaaagac
cttgagactatgcgtatgcagacagaaatggagctgaggatgtttagagagaatgagtat
atttacaaaagtatgcgggaggctgccctgaagaaccagccaatgaacatgatgaacgaa
cctatggcggagagcgtcaagaatctcttccgccggcagaagaagtga
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