Oncorhynchus nerka (sockeye salmon): 115140318
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Entry
115140318 CDS
T07952
Name
(RefSeq) RING finger protein 37-like isoform X1
KO
K10600
U-box domain-containing protein 5 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115140318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115140318
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115140318
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
U-box type E3
115140318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5918
U-box
zf-RING_5
zf-RING_UBOX
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
115140318
NCBI-ProteinID:
XP_029534505
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All DBs
Position
LG13:complement(63680417..63687591)
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AA seq
719 aa
AA seq
DB search
MVVNLCLPHFKTTIQCDKLCADGYDVTNLLSADPAVRRRGFKLEYFLRPPVQVTLQFGFQ
VEVCRVDVELWPWGMDRGQACKRLEISTSSDPPLPHNHSLEQGQTQAQQGQEKGQQWDQA
KAQFKGHQWSLQAQQYSLQGQEKSQQWTQRGQTHSHTDTSQGAFHLVGRCELTEETHVSF
SHPCFRPRPPFSSLPPAPREGCRQEELWSRGPLSLGSVKQLRVTVPYGAGASAMGLKALA
VWGLPSRCCPPDEVERVRITHENASLRPVPRLSHLASAQPSPVNQPPAGSQTTTATSLLQ
VPEEFLDPLTQEVMLLPMLLPSGVSVDSSTLEEYQRREATWGRVPNDPFTGVPFVPESQA
LPNPHLKSRIDRFLLQTGLEVRDGAVGRQGHGESPQPSRLIPPQRTGESRDSAVTTAAAV
ESANHQGTLSRNSVTRTQTNQKGAESVITQRSQLTQYRGTGAFNNRAKNGNGKDRCAGKV
GPKEGAVDRVSSQEGGPDLGTRRKRELEVWATLIRSKGKGEPTGPKAASASAGHSKELLP
DLKRPRTDANPTISSATVPSSSSHEQRLSASLDYEQRLSTSLDQEQRLSASLDQALLSAL
QGRPSFTSYPSQTPQLQHKHTDTPADTPTAFPISLFPPLLSPLPFLSLPGENRCGSCSCS
LSVYSTSPSAYRLPCGHFLCRPCLHRKSRPLVTTAMPNHILCPTCHSPAASSDITHVHH
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgaatctctgcctaccacatttcaagaccaccatccagtgtgacaagctatgt
gcagatgggtacgacgtcaccaacctcctatcggccgacccagcagtccggaggcggggt
tttaagctggagtacttcctgcggccgcctgttcaggtgacactgcagtttggcttccag
gtggaagtgtgtcgggtggatgtggagctgtggccctggggcatggaccgaggacaggcc
tgcaagaggctggagatcagcaccagctctgaccccccactcccccacaatcacagctta
gagcagggccaaacccaggcccagcaaggccaagagaagggccagcaatgggaccaagcc
aaggcccagttcaaaggccaccaatggagcctccaggcccaacaatatagtctacaaggc
caggagaagagccagcaatggacccaacgtggccaaacgcacagccacacagacaccagc
cagggggcttttcacctggtgggacgctgtgaactaacagaagagacccacgtcagtttc
tcccatccctgtttccgcccgcgccctcccttctcctccctgcccccggcaccccgtgag
gggtgtagacaagaggagctgtggagcaggggcccgctctcactaggctctgtgaagcag
ctccgtgtgacagtgccgtacggtgcgggtgcctccgcgatggggctcaaggcactggca
gtgtgggggctgccttctcgctgctgccctccagacgaggtggagagagtgaggataact
catgagaacgctagcctgagaccagtgccacggctcagccacttggcatcagctcagcct
tcacctgtcaatcaaccaccggcagggtcacagacgacaacagcaactagcctcctgcaa
gtacctgaggagttcctggacccgctgacccaggaagtgatgttgttgcccatgctgctg
cccagtggagtgtctgtggacagctctactctggaggagtaccagaggagggaggctacc
tggggtcgcgtccccaacgaccccttcaccggtgtccccttcgtccctgagtcacaggcc
ctccccaacccccacctgaagagccgcatcgaccgcttcttgctccagacagggttagag
gtcagggatggagcggttgggaggcagggccatggtgagagtccgcagccctccagactc
atacctccacagaggactggagagagtagggactctgctgtcaccactgctgctgctgta
gagtcagccaaccaccaggggacacttagccgaaacagtgtgactcgcacacagactaac
caaaaaggggcagaaagtgttattacacagaggagccagcttacgcagtacagggggact
ggggcttttaacaacagggcgaagaatgggaatgggaaggatcggtgcgctggtaaagtt
ggccctaaagaaggggcagtggatagagtgagttcccaggagggagggccagacttaggg
acaaggagaaagagagagcttgaggtttgggccactctgatccgttctaagggaaagggt
gagcccaccggacccaaagcagcctctgctagtgctggtcactccaaggagctacttcct
gacttgaaaagaccaagaacagatgcaaaccccactatctcctcagccacagttcctagc
agtagctcccatgaacagcgcttgtctgccagtctagactatgaacagcgtttgtctacc
agtctagaccaagaacagcgtttgtctgccagtctagaccaggcccttctctcagccctg
cagggtcgaccctcctttacctcctacccctcccaaaccccccagctccagcacaaacac
acagacacacctgctgacaccccaacagcttttcctatttctctctttccccctcttctc
tccccacttccctttctctctctcccaggtgagaacaggtgtggttcctgttcctgctct
ctatcagtctactcgacctctccatcagcatatcgcctgccctgtggtcacttcctgtgc
cgcccctgcctacacaggaagtcccgcccacttgtcactacagcaatgcccaatcacatc
ctctgtcccacctgccatagccctgccgcttccagtgacatcacacacgtgcatcactga
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