Oncorhynchus nerka (sockeye salmon): 115140329
Help
Entry
115140329 CDS
T07952
Name
(RefSeq) syntaxin-binding protein 1-like isoform X1
KO
K15292
syntaxin-binding protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140329
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115140329
Membrane trafficking [BR:
one04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
115140329
SNARE
SNARE associated proteins
Syntaxin-binding proteins
115140329
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
115140329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
YlbD_coat
SGT1
DUF6079_3rd
FRB_dom
Motif
Other DBs
NCBI-GeneID:
115140329
NCBI-ProteinID:
XP_029534521
LinkDB
All DBs
Position
LG13:64643125..64677192
Genome browser
AA seq
604 aa
AA seq
DB search
MAPLGLKAIVGEKIMNDVIKKVHKKGEWKVLVVDKLSMRMMSSCCKMTDIMSEGITIVED
IGKKREPLPSMEAIYLITPNDETVEALIDDFRDPRSPRYRGAHVFFTDTIPDSLFNLLTK
SRASKAMKTLTEIHIAFLPYESQVFSLDKTDAFQDFYSPYKADIKHNMLERCAEQIATLC
NTLKEYPGVRYRGEYKDCTTLAQLLQDKLDGYKADNPTMGEGPDKSRSQLLILDRGFDPV
SPILHELTLQAMGYDLLGIENDVYKYDTSGMGEVKEKAVLLDEDDDLWMSLRHKHIAEVT
TAVTRSLKEFSSTKKMNTGEKTTMKDLAQMLKKMPQYQKELSKYSTHLHLAEDCMNRYQG
TVDKLCRVEQDLAMGTDAEGEKIKDPMRAIVPVLLDKDVTVFDKIRIILLYIFMKNGVSE
ENLCKLLQHANIPPEDSDIISNMAHMGMPIISEGNPTRKVKKTDRKERVSEQTYQLSRWT
PLIKDIMEDAIEDKLDPKQYPYISQRTASTHSSAPSSARYGNWHKNKGPTEMKNGPRVIV
FIIGGMTFSEMRCVYEVTQANGKWEAIIGSTHMLTPTKYLKELQHPDFLDPNAAPEEPEP
APAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atggcaccactcggactaaaagccattgtgggagaaaagattatgaatgacgtcatcaag
aaggtacacaagaaaggagaatggaaggtgctggtcgtagacaagctgagcatgaggatg
atgtcatcctgctgtaagatgacagatatcatgtcagagggcatcaccattgttgaagac
atcggaaagaaacgggagcctctccctagcatggaggccatctacttaataactcccaat
gatgagactgtggaggcactcatagatgacttcagagaccctcggtcgcccagatacaga
ggagctcacgtcttcttcactgacacaatcccagattcattgtttaacttgttgacgaaa
tcccgcgcgtccaaagccatgaagaccttgactgagatccacatcgcctttctgccctat
gagtctcaggtgttttccctggacaagacagatgccttccaggacttctacagcccctac
aaggctgacattaagcacaacatgttggagcgctgtgctgagcagatcgccactctctgc
aataccctgaaggaataccctggcgtcagatacagaggggagtataaagactgtaccact
ctggctcagctcctgcaggacaagctggacggctacaaggcagacaaccccaccatggga
gagggtccggacaagtctcgctcccagctcttgattctggaccgaggctttgacccggtc
tctcccatcctccatgaactcaccctccaagctatgggctatgacctgctgggcatcgag
aacgacgtctacaagtatgacaccagcgggatgggggaggtcaaggagaaggcggtgttg
ctggatgaggacgatgatctgtggatgagtctcagacacaagcatattgcagaagtcacc
acggctgtgacccgttctctgaaagaattctcatccaccaaaaagatgaacacaggagag
aagaccacaatgaaagacttggctcagatgctgaagaagatgccccagtatcagaaagag
ctgagcaagtactccacccacctccacctggctgaggactgtatgaaccgctatcagggc
accgtggacaagctgtgtcgtgtggagcaggacctagcgatgggtacggacgcagagggg
gagaagatcaaggaccccatgagggccatcgtgcccgtcctgctggacaaagacgtcact
gtcttcgacaagattcgcatcatcctcctctatatcttcatgaagaacggtgtttcggag
gagaacctgtgtaagctcctccagcatgctaacatccctcccgaggacagtgacatcatc
tccaacatggcccatatgggcatgcccatcatctcagaggggaatccgacccgcaaggtg
aagaagactgaccggaaggagagagtgagtgagcagacctaccagctgtcccgatggacc
cctcttatcaaggacatcatggaggatgccattgaggacaaactggatccaaagcagtac
ccctacatctcccaacgaactgcctccacccactccagcgcgccatcaagtgcccggtac
ggaaactggcacaagaacaagggccccacagagatgaagaatggtcctcgggtcatcgtc
ttcatcatcggaggcatgacctttagcgagatgcgctgcgtctacgaagtcacacaggcc
aatggcaaatgggaggccatcattggctccacccacatgctcactcccaccaaataccta
aaggagctgcagcaccctgacttcctggaccccaacgctgcccctgaggaaccagagcct
gcccccgcagaatga
DBGET
integrated database retrieval system
