Oncorhynchus nerka (sockeye salmon): 115140333
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Entry
115140333 CDS
T07952
Name
(RefSeq) scavenger receptor class F member 2-like isoform X1
KO
K24319
scavenger receptor class F member 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115140333
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
115140333
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_STAB1-2
EGF_C8A_B_C6
EGF_2
Osw5
Motif
Other DBs
NCBI-GeneID:
115140333
NCBI-ProteinID:
XP_029534530
LinkDB
All DBs
Position
LG13:65847389..65883680
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AA seq
959 aa
AA seq
DB search
MELNFFFAVVVVVCSFFSSFSQELNPKGRNVCKLPGSPGLVCCSGWGQLGNECLTPLCVG
NFTCKENEVCVRPNECRCRHGYFGASCDTKCPTQFWGPDCKGKCQCFPNGHCDDMTGKCT
CNPNRWGPNCQKPCLCQKGKCDQDTGSCTCHHGFWGPQCANNCYCSLNSVCDQNTGRCNC
SLGWSGRNCAIQCNCNNSPCEQFTSRCQCQERHWGQRCERYCQCVHGKCNQVDGSCTCTP
GYRGKFCREPCPAGFYGQNCKNRCGHCKGQQPCKITEGRCVTCERGWNGTKCDQMCLSGF
FGENCRDVCPPCKDGHFCNRIDGKCSHCNPGWIGDRCEVRCPNGTYGDNCENDCSHCFNG
VCHIATGECLCDPGFYGTYCNMTCQMGQYGVNCAQTCTCHDNNCNPVSGACNLQPNQRMG
VIAAGTLVFFLLIVLLSLLCCCCLCRNKHHQNPDQDNSTNSKKARRILCGRFSRISTKLP
RIPLRRQKLPKVAVAHHPENTFNCSFIEPPSVAELPSPSSWSSQESFDSFEEEPSDDGPV
YCVPHEESLNENKVKGSPPLAEMPAAAFHSEDDTGGYTSLKDTSATTYKPQDGSEAPLKS
SDSEGSTSSSESAIGALYARIAHLSKNSKEEEDGGDSMVTIEVKGKRKPPSPGGKTRTKP
RPPDPSTKPKVSWIHGNNGGTTLQVEKPNQGDKGLTFPKVKTTRSSSNSSAKSEERQRLK
ENSKEKSKREEKGTVVNGSPSKHKAHWVGRSRENMNHMEHINGVVQNALKKIGNFHNSDK
KASAVEIAKEAPKSPKVIHPHMNSEAATLLAAQLKEKTQSITRNEGTGLVKTNGLSTPIL
RGRGDREKPTPPQKAKRTTAPTPGHQGSNKPLLPTTTSLQKMVGVEDPATPEVAPKSPEK
QDLNGSRVVEGCGGAGDPTLKKTPIKKPPRKKGKDGTLDTTLETKTPTKTAIMPPQIVK
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggaattgaattttttttttgcagttgttgtggtggtttgttcatttttttcgagtttc
agccaagaactcaatcccaaaggcaggaatgtatgcaaactaccagggtcaccaggcttg
gtatgctgcagtgggtgggggcagctaggcaatgaatgtttgacacctctttgtgtaggg
aactttacctgtaaggagaatgaggtgtgtgtcaggcccaatgaatgtcgctgtcgccat
ggatatttcggagccagttgtgatacaaagtgcccaacccaattctggggccccgactgc
aagggcaagtgccagtgcttccccaacggccactgtgacgacatgacgggcaagtgcacg
tgcaaccccaaccgctgggggcccaactgccagaagccctgcctctgccagaagggcaag
tgtgaccaggacacgggctcgtgcacatgccaccatggcttctggggccctcagtgtgct
aacaactgctactgcagtctcaactctgtgtgtgaccagaacacaggaaggtgtaactgt
agtctaggttggtcggggaggaactgtgccatccagtgtaactgtaataactcaccatgc
gagcagtttacgagtcggtgccagtgccaggagagacattggggccaacggtgcgagagg
tattgtcagtgtgtccatgggaagtgcaaccaggtggacggctcgtgtacctgtaccccg
gggtaccgagggaagttctgcagggaaccgtgtcccgctggattctatggacagaactgc
aagaacaggtgtgggcactgtaaggggcagcagccctgtaagataactgagggcaggtgt
gtaacctgtgagaggggctggaacgggaccaagtgtgaccagatgtgcctgtcaggcttc
ttcggagagaactgccgggatgtgtgtcctccgtgtaaagacggccacttctgcaaccgc
atcgacggaaagtgctcccactgcaaccccggttggatcggggacaggtgcgaggtgcgt
tgtcccaacgggacttatggggataactgtgagaatgactgcagccactgttttaacggc
gtctgtcacattgccaccggagagtgcctgtgtgacccaggattttacgggacatactgc
aacatgacgtgtcagatgggtcagtatggagtgaactgtgcccagacctgcacctgtcac
gacaacaactgtaatccggtgtctggggcctgcaacctacagcctaaccagaggatgggt
gtgatcgcggcgggaaccctggtcttctttctgctcattgtcctcctctcactcctctgc
tgctgctgcctctgcagaaataaacaccaccagaatcctgaccaagacaactctaccaac
agtaaaaaagccaggcggatcctgtgtggacgatttagccgaatcagcaccaaactcccc
cggatcccactgagacggcagaagctgcctaaagtagccgtagcccaccaccctgagaac
acattcaactgcagcttcatcgagcccccctctgtagccgagctgcccagcccctcctcc
tggtcctcccaggagtcctttgattctttcgaagaggaacccagtgatgatggccctgtg
tactgtgttccccatgaagagtcgctgaatgagaataaggtgaagggcagtccccctctt
gctgagatgccagcagcagccttccacagtgaggatgatacaggtgggtatacctcccta
aaagacaccagcgccaccacctacaaaccccaggatgggagtgaagcgcccctcaagtcc
tcagacagcgagggctccaccagcagttctgagtcagccattggggccctttatgcccgc
attgcacacctctccaagaattccaaggaggaagaagatgggggcgacagcatggtcacc
atcgaggtcaagggtaaaaggaaaccaccgtccccggggggaaagaccaggaccaaacca
cgcccgccggacccctccaccaaacccaaggtgtcgtggatccatgggaacaacgggggt
accactctccaggtggagaagccgaaccagggggacaaggggctaacatttcccaaggtg
aagacaaccaggagctccagcaacagctcagccaagagcgaagagaggcagaggctgaag
gagaattccaaggagaagagcaagcgagaggaaaaggggacggtggtcaatggctcccct
agcaaacacaaggcccactgggtggggaggtccagagagaacatgaaccacatggagcac
atcaatggggtggtgcaaaacgctctaaagaagattggcaacttccacaactccgataag
aaggcatccgctgtggagatcgccaaggaggcgcccaagagccccaaagtgatccaccca
cacatgaactcagaggccgccacactcctggccgcacagctcaaggagaagactcagagc
atcacccggaacgagggcacaggcctggtaaagaccaacggcctgtccaccccgatcctc
cggggccgaggagaccgggaaaagcccacccctccgcaaaaggccaaacggaccaccgct
cccacaccaggccaccagggctccaacaagcctctgctgcctaccaccaccagcctccag
aagatggtgggtgttgaggacccagctacccccgaggtcgcccccaagagcccggagaag
caggacttgaacggctctagagtggtagagggttgtggtggtgcgggggaccccacgcta
aagaagacccccatcaaaaagcctccccgaaagaaaggcaaggacgggactttggatact
actctggaaactaagacaccgacaaagacagcgattatgccaccgcagatcgtcaaatag
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