Oncorhynchus nerka (sockeye salmon): 115140522
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Entry
115140522 CDS
T07952
Name
(RefSeq) claudin-20-like
KO
K06087
claudin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03272
Virion - Hepatitis viruses
one04382
Cornified envelope formation
one04514
Cell adhesion molecules
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
115140522
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115140522
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115140522
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
115140522
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115140522
04147 Exosome [BR:
one04147
]
115140522
04515 Cell adhesion molecules [BR:
one04515
]
115140522
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115140522
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
115140522
Exosomal proteins of colorectal cancer cells
115140522
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
L1 family
115140522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
115140522
NCBI-ProteinID:
XP_029534714
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All DBs
Position
LG13:29409242..29411956
Genome browser
AA seq
313 aa
AA seq
DB search
MASSAMQILAFALALLGVLGATVATLLPNWKVSADVGSNIMTAISQMQGLWMDCTWYSTG
VFSCTLKYSVLSLPAYLQTARTTMVLSCMMACLGLCLAALGLKCTRWGGSHRAKGHAAIG
AGGCFILAGILCLVPASWFTNEVITTFLDSNVPESSKYEPGGAVYVTFVSAGLLLAGGVI
FCLSCPGKREGQLDYTSTSTSTTFPDKLLQQQINQEQIQRDQLQRDLILREQLQRGQKDF
EQQTSPNEQSSREQLQWGDKGPQDEAHEADKIQQEEPLQEKPLHEDKGTQQFYSPSRVPP
KDARAGYSLQDYV
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccgccatgcagatcctcgcctttgccctggcgctgctgggcgtcctgggc
gccactgtggccacgctgctacccaactggaaggtgagtgccgacgtgggctccaacatc
atgactgccatctcccagatgcaggggctgtggatggactgcacctggtacagcaccggc
gtgttcagctgcaccttgaagtactccgtgctgtcgctgcccgcctacctgcagaccgcc
cggacgacaatggttctgtcgtgcatgatggcttgccttggcctctgtctcgctgccctg
gggctcaaatgtacccgctgggggggcagtcaccgggcaaagggacacgcggccatcggg
gcggggggttgcttcatattggctggcatcctttgcttggtgcccgcttcctggttcacc
aatgaggtaatcactaccttcctggactccaacgtacccgagagcagtaaatacgaacct
gggggggccgtgtacgtgacctttgtctctgccggcctactgctggccggtggggtcatc
ttttgtttgtcgtgtcccgggaaaagagaggggcagttggattatacgtcgacatccacc
tctaccacatttcctgacaaactactgcagcagcagataaaccaggagcaaatacagcgc
gaccagctccagcgtgacctgatactgcgggagcaactgcaacgggggcagaaggacttt
gaacagcagacgtctcctaatgagcagtcaagccgcgagcagcttcaatggggtgacaaa
gggccccaggatgaggcccacgaagctgacaaaatccagcaggaggagcctctacaggag
aagcctctacatgaagacaagggaacgcaacagttctactctccatccagagtccctcca
aaagacgcccgggctggctacagcctgcaggactatgtttaa
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