Oncorhynchus nerka (sockeye salmon): 115140586
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Entry
115140586 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115140586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115140586
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115140586
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115140586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
zf-C3HC4_4
HTH_DNAJC9
zf-RING_4
zf-RING_5
KCNQ2_u3
Motif
Other DBs
NCBI-GeneID:
115140586
NCBI-ProteinID:
XP_029534790
LinkDB
All DBs
Position
LG2:44152506..44160585
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AA seq
826 aa
AA seq
DB search
MAENDVDMMEVGDNTYSSGTSGEPVIVTQPHSCPSSHTQRTVLTDKQKDLYLTDDESEEG
LDTPPQGTDLYRAKEDIEGNEDLNQAKVEERKQPSASPDEATVYVTVKWPRKDLPPKWES
TLEKTLQSWLNKDFGDKTTDCTLKGLYCNESWAEVKITPSTDVKVLLNQRATQMIFKDQA
KTTATVQFHKTAPSTSWNQSDFKPSSMDGSPPTSHTPQDVKLPMTVNTIIHLSGIPHEAQ
VALQTRFSQYHTYHSLTFTGNFEEVEKFQREVNKVIKEAEARSAGDWNGLAATPTMTHKG
MNTHEAPGQTEMSFPVPLTLFGYINQAYQKEMEDIEKRNGVKINADVKVSIKEDSEKTGR
DCLLPEAYQELIDLFQKCAGDFHSISAHLPHMNLEDLQNTLNNIQNEESRLVLNVSANSC
NVFGPKQSMVAVRKDFGVGHSSTVKTFGMDHSSTDEAFGSGRRSTEIPQKIVLDIKDPLV
SSGLSMDPAHWELIQKIFDEQIKAIQNKFGVVFMNNPSQGKVRVTTRSIKSQHTASLESH
AIRALMHLYQKVATSTMSCYLLDTTQARTVGDMLEKIRSRHQCVGAGEKYGPWRLIGLPE
HLGPAVKELEEKLGGPVFKEEDKQRIVYPEDFNTGAAEVGAAGEATCPICMDIFTNKEKL
SCTHEFCKECLRRSVESMGPSCPVCKDVYGKVEGDQPDGTMTHTIYYTNLPGFTQCETIV
IDYDIPDGKQTKKHPNPGKHFYGTQRRAYLPNNIEGNEVLKLLKKAFNQRLIFTVGISRT
TGAENVVTWNDIHHKTNIGGGAQNFGYPDHDYLSRVKDELKAKGIK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgacgttgacatgatggaagtgggtgataatacctattcttcaggaaca
agtggggagccagtgatagtaacacagccacattcatgtcctagcagtcacacccaaagg
actgttttgactgataagcaaaaggacctgtatttgacagatgatgaatctgaagaagga
ctggatacaccaccccagggcacagatctgtatcgggcaaaggaggatattgagggaaat
gaggatctgaatcaagctaaggttgaagagagaaagcagccatcagcatctccagatgag
gctacagtctacgtcactgtgaagtggcctaggaaagaccttccaccaaaatgggaatct
acactagagaaaactctccagtcatggctcaataaagactttggtgataagactacagat
tgtaccttgaaaggtctttattgcaatgagtcatgggctgaggtcaagataactccctca
acagatgtaaaagtacttctgaatcagagggcaacacagatgatcttcaaagaccaggcc
aagacaaccgctactgtgcagtttcacaagactgcaccatctacatcctggaaccaatca
gactttaaacctagctcaatggatggctctcctccaacatcacacactccacaggatgtc
aaactcccaatgactgtaaatactatcattcatctcagtggcatcccacatgaagcacag
gttgcccttcagaccaggttcagtcagtaccacacttatcactcactgacctttactggg
aactttgaggaagtggagaagttccaaagagaggtgaacaaggtcatcaaggaagctgag
gctaggtcagcaggtgattggaatggtttagcagcgacaccaaccatgactcacaaggga
atgaacacccatgaagctcctgggcaaacagaaatgagctttccagtcccactgaccctc
ttcgggtacattaaccaggcctaccagaaggagatggaggacatagagaaaagaaatgga
gtcaaaatcaatgcagatgtgaaggtgtccatcaaagaagattcagagaaaacaggcaga
gattgtctactgcccgaagcctaccaggagttaattgacctcttccagaagtgtgcaggt
gattttcacagcatctccgcacatctgccacacatgaatctagaagacctccagaatacg
ctgaataacatccagaatgaggagtccaggctggtgctgaatgtgtccgccaacagttgc
aatgtgtttgggccgaagcagagcatggtagcagtcaggaaggattttggggtgggccac
agctccacagtgaagaccttcggaatggatcacagctccacagatgaggcctttggatct
ggaaggagatctacagagattccacagaagattgtgcttgacatcaaagacccactggtg
tcaagtgggctgtccatggacccagcccactgggagctgattcaaaaaatatttgatgaa
caaataaaagcaatccaaaataaatttggagtagttttcatgaataatccctctcagggg
aaggtcagagtgacaaccagatctatcaagtcccaacacactgcctctctggaaagccac
gccatcagagctctcatgcacctctaccagaaggttgccacgtcaacaatgagctgctat
ctgctagacactacccaggcacggactgtgggggatatgctggagaagatccgctctcga
caccaatgtgttggggcaggagaaaaatacggtccctggaggctgattggcctaccggaa
catttaggccctgctgtcaaagagcttgaagagaagctgggtgggcctgtgtttaaagag
gaagacaagcagaggattgtgtatcctgaagacttcaacactggagcagctgaggtggga
gcagctggagaagcgacatgccccatatgcatggatatatttaccaacaaggagaagttg
tcgtgcacccatgagttttgtaaagagtgtctgaggcggtcagtggaatccatgggcccc
agctgtcctgtgtgtaaggatgtgtacgggaaggtggagggagaccagcctgatggaaca
atgacacacactatttattacaccaacctacctggattcactcaatgtgaaacgatagtt
atcgactatgatattccagatggaaaacagacgaagaaacatcccaaccctggaaagcac
ttctatgggacccaaagaagggcttatctacccaataacattgaggggaatgaggtcctg
aagctgctgaagaaagcatttaatcagaggctgattttcacagttgggatctccagaacc
actggggcagaaaacgtagtgacctggaatgacattcaccacaaaaccaacatcggagga
ggggcacaaaatttcggctatcctgaccatgactacctgagcagagtgaaggatgagctg
aaagccaaaggcatcaaatga
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