Oncorhynchus nerka (sockeye salmon): 115140659
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Entry
115140659 CDS
T07952
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115140659
03037 Cilium and associated proteins [BR:
one03037
]
115140659
Transporters [BR:
one02000
]
Other transporters
Pores ion channels [TC:
1
]
115140659
Cilium and associated proteins [BR:
one03037
]
Other cilia and associated proteins
Stereociliary proteins
115140659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Na_K-ATPase
COX16
Piezo_TM1-24
Toddler
Motif
Other DBs
NCBI-GeneID:
115140659
NCBI-ProteinID:
XP_029534853
LinkDB
All DBs
Position
LG13:complement(41639916..41654078)
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AA seq
937 aa
AA seq
DB search
MEESRVDDEEDTVIDSDGRQERAKEKERKKERDRKRRRNVARRASSARKEGKELEDRPGR
EERRGQKKRDKEGKGKGKGGEDERQEEVKNDTVAKTQKNFSNENTRKLEQKEIEVVGEED
GDTEEKRKNGRSEKGGKKEDNGRGETVEKKQKKKRVETSAEHESSEEEEDEEEKVGEEKP
EVLSPEELEKLKEEVDERKKLISTLRGKPWPMRKKLLTLRESHEFVEKYEGALGKGKSRK
LYAYKVMMLKKWMKFQRDFENFKTACVPWEMKIKEIESHFGSSVASYFIFLRWMYGINMI
LFGLTFGLVMVPEALMGRPYGSMPRKTVPRTDEANAMDFAVLWDFGGYAQYSVLFYGYYN
SQRAIGWLKFRMPLSYFLVGVGTVAYSYMVVIRTMARNANEDGGGDNNSFNFSWKMFTSW
DYLIGNPETADNKFASITTSFKEAILEEQESRKDDNIHLTRFLRVLANFLVLCCLAGSGY
LIYFVVRRSQKFALEGLESHSWWERNEVNMVMSLLGMFCPMLFDVISALENYHPRIALQW
QLGRIFALFLGNLYTFIIALMDEINLKREEEEVLKLNMTIWEASLYNGTLGANSTAPPIT
VHPADIPRGPCWETMVGQEFVRLIVSDTMTTYITLLIGDFLRAVLVRFLNYCWCWDLEAG
FPSYSEFDVSGNVLGLIFNQGMIWMGAFYAPCLPALNVLRLHVSMYLQCWAVMCCNVPQE
RVFKASGSNNFYMAMLLVILFLSTLPAIYTIVTIPPSFDCGPFSGKSRMFDVIQETLESD
FPAWFGKVFSYASNPGLVLPFLLLMVLAIYYLQSTSKSYKQANLELKKKLQTQNEENKKK
TKMAALKAAMDLEEAQKARSEAPRQQRNNNASQQSYTEDREKKGGEHRAHQGKSDHQIPP
SATSPPAPRGHRIPGPLPGNQWQPAPGVQRVPNSQRH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atggaagagagcagagtggatgatgaagaggacacagttattgactctgatgggaggcag
gagagggcaaaagagaaggagagaaagaaagagagggacagaaagagaagaagaaatgta
gcaagaagagcttccagtgcaagaaaagaaggaaaggaattggaggacagaccaggaaga
gaggaaaggagaggacaaaaaaagagggataaagaggggaaagggaaagggaaaggggga
gaggatgagaggcaggaagaagtgaagaatgacacggttgctaaaactcaaaagaatttc
agcaatgaaaacaccagaaaactggagcaaaaagagatagaggttgtaggagaggaggat
ggggataccgaggagaagaggaaaaatggacgctcagaaaaaggcgggaaaaaggaggac
aatggaagaggagagacagttgagaagaaacaaaagaaaaaaagggttgagacaagtgcg
gagcatgagtcatcagaggaagaggaggatgaggaagagaaagtgggagaggagaaacca
gaggtcttgtctcccgaggagttggagaagctgaaggaggaagtggatgagaggaagaaa
cttatctcgaccctaagaggaaagccttggcccatgaggaagaaactgctaactctacgg
gagtcccatgagtttgtggagaaatatgagggagctcttgggaaaggaaagagcagaaaa
ctgtatgcatataaagtcatgatgttgaagaaatggatgaagtttcagagggactttgaa
aacttcaaaactgcttgcgttccatgggagatgaaaatcaaagagattgagagccatttt
ggctcctcggttgcctcctacttcatattcctgaggtggatgtatggcatcaacatgatc
ctctttgggctgacgtttggtctggtcatggtgccagaggctctgatgggcaggccgtat
ggtagcatgcccagaaagactgtccctagaactgacgaagccaacgccatggactttgct
gtcctatgggactttgggggctacgcccagtattctgtcctcttttatggctactacaac
agccagcgcgccattggctggctcaagttccgcatgcccctctcctacttcctggttggc
gtgggaactgtggcctatagctatatggtggtgataaggactatggcccggaatgctaat
gaggacgggggcggtgacaacaacagcttcaatttcagctggaagatgttcaccagctgg
gattacctcatcggcaaccctgagacagctgacaacaagtttgcctccatcaccaccagc
tttaaggaggccattctggaggaacaggagagcaggaaggatgacaacatccacttgact
cgttttctgcgggttctggccaacttcctggtgctgtgctgtctagcaggaagtggatat
ctcatctactttgtggtgcgtcgctcccagaagtttgctttagagggactggagagccat
agctggtgggagaggaatgaggtgaacatggtgatgtccctcctggggatgttctgtccc
atgctgtttgatgtgatcagtgcactagagaactatcacccccgcattgctctacagtgg
cagctgggacgcatcttcgccctattcctggggaacctctacaccttcatcatcgcactc
atggatgagatcaacctcaaacgggaggaggaggaggtgctgaagcttaatatgactata
tgggaggccagtctgtataatgggaccctgggagcgaatagcacagctcctcccatcacc
gtccaccctgccgacatcccacgaggaccctgctgggaaaccatggtgggacaggaattt
gtccgactcattgtgtcggatactatgacaacctacatcacgctcctgatcggggacttc
ctgcgtgctgtgctggtgcgtttcctcaactactgctggtgttgggatttggaggctgga
tttccctcctactcagagttcgatgtcagtgggaatgtcctgggcctgatcttcaaccaa
ggcatgatatggatgggtgcgttctatgccccctgcctgcctgctctgaacgtgctgaga
ctgcatgtgtcaatgtacctgcagtgctgggccgtcatgtgctgtaatgttcctcaggag
agggtgttcaaggcctcaggctccaacaacttctacatggctatgctactggtcatcctt
ttcctctcaacactgcctgccatctacaccatagtcactatccccccctccttcgactgt
ggccccttcagtgggaagagccgcatgtttgatgtgatccaggagacgctggaatctgat
ttccctgcctggtttgggaaggtgttcagctacgcctccaaccctggcctggtgctgcct
ttcctactgctgatggttttggccatttattacttgcagtctacatccaaaagctacaag
caagccaacctggagttaaagaagaaacttcaaacccaaaatgaagagaacaagaagaag
actaaaatggcagcactgaaagctgccatggatttagaggaggctcaaaaagctcggtca
gaagcaccgcggcaacagagaaacaacaacgcctctcagcaatcttatacggaagataga
gaaaagaagggtggggaacacagagcacatcaaggaaagagcgaccatcaaattccccct
tctgccaccagccctccggccccgaggggccacagaatccctgggcccctaccaggtaac
cagtggcaaccagcacccggtgttcagagggtcccaaactcccagagacactga
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