Oncorhynchus nerka (sockeye salmon): 115140748
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Entry
115140748 CDS
T07952
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115140748
Enzymes [BR:
one01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
115140748
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
115140748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
115140748
NCBI-ProteinID:
XP_029534913
LinkDB
All DBs
Position
LG14:100041..106512
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AA seq
741 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESIEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGGENNKVKNL
LIEGDGDDDDLVDDYGALEDSSEGEVDGDGEELLPIERAARKQKKLQEAMGQESDDDDDN
NKGKSGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDNVDVLSH
FATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEIQRPVTI
RTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHYMLQGAS
SFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVVGNIHRL
GVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQRLAHLQK
ELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDFGKEGFT
RFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNTVPTTAVDKDGEEETEPSEAVEV
TADSSDEDGPSKAGSKNKSKKQKPVPGKPAVSQKATANGKPAKSIAKKTTNPSTLKKNEK
PTGPKKAKIAKMDGGTVKVDGELKKSNTVKTGETTKQSKEGSRFEKKGDKQRKSPMQSKK
RMGKNKFNKLKKLLKKEEVGQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacttatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcattgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggccaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggaggggagaacaataaagtgaaaaacctg
ctaattgaaggagatggtgacgatgatgacctggttgatgactacggtgcattggaggac
agcagtgaaggagaagtagacggtgatggagaggagctgctccccatcgagcgagctgcc
aggaagcagaagaagctgcaggaagcaatgggccaggagagtgatgatgatgatgataat
aataaggggaagagtggagatgaagacatggatgaagatgacacggtacaggctaattta
gatgatatggacaaattcatactacctggagcagaggagatagcaaaagagggtgttttg
cttgtagacctgcagaccatccaccagagaataaaggacaacgtggatgttctctctcac
tttgcaaccaagagagaggaggggaaagagagaacagagtacctctctctcctcaaaaaa
gatctttccacttactacagctacaacaatttcctcatagacaaactgctggatatcttc
ccagtgtcagagctgattgatttcctggaggccaatgaaattcagcgacctgtcaccatt
cggaccaatacactgaagacaaggaggagggacttggctcaggccctgatcaacagaggg
gtgaatctggatcctctggggaagtggtctaaagtgggcctggtcatctttgactcctcg
gtacccataggtgcgaccccagagtacctagctggtcactacatgctgcagggagcctcc
agcttcctgcctgtcatggctctctctccccaggagggggagactgtgctcgacatgagc
tcagctcccgggggaaagaccacctatatggcccagttgatgaggaacacaggtgtgatt
gtggccaatgatgccagtgctgacagactgaagagtgtggtgggcaacatccaccgtctg
ggagtcaccaactcaatgatctgtaactacgacggaaggcagttccctaaggtcatgggg
gggtttgacagagtgctgcttgatgctccctgctcaggcacaggagtaatctccaaagac
cctgctgtgaagacaagtaaagacgagtctgacatccagcggttggcccacctgcagaag
gagctcatcctggcggccatcgactcggtcaatgctgagtctccctctggaggctatctg
gtgtactgcacatgctctataatggtggaggagaacgagtgggtagtggactatgctctc
aagaaaagaaacgtcaaactcgtccagactggactggactttggcaaagaaggtttcacc
agattcaaagagagacgattccatccctctctgaaactctcacgccggttctatcctcat
tcccacaacatggacggtttctttgtggccaagctgaaaaagttctccaacacggtccca
accacagcagttgacaaagacggagaagaggaaaccgagccatctgaggcagtagaggtt
acagctgattcctctgatgaggacgggccatctaaagcagggtctaagaacaagtccaag
aagcagaagccagtccctggcaagccagctgtgtcacagaaggccacagccaacgggaag
ccagccaaaagcatcgccaagaaaacaacaaacccaagcaccttgaaaaagaatgaaaaa
ccaaccgggccgaaaaaggcaaagatcgctaagatggatggtgggactgtgaaagtggat
ggagagctcaagaagtccaacacagtcaaaacaggggaaacgaccaaacagtcaaaggaa
gggagcaggtttgagaaaaagggcgataaacagaggaaatcccccatgcagagcaagaag
agaatggggaagaacaaattcaataagttgaagaagctgctgaaaaaagaagaggttgga
caatga
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