Oncorhynchus nerka (sockeye salmon): 115140839
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Entry
115140839 CDS
T07952
Name
(RefSeq) protein SMG9
KO
K18735
protein SMG9
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115140839
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
115140839
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
AAA_16
ABC_tran
AAA_30
DUF6079
AAA_18
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115140839
NCBI-ProteinID:
XP_029535109
EnsemblRapid:
ENSONEG00000026627
LinkDB
All DBs
Position
LG14:2500816..2509732
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AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRDRDVGPPGQNLSGPSRDREYVPRERRDGSEEPPGPLLQ
KTPIILAKPPGERSKPSQSVPTSGGQALEKPIMLIKSREDGGKPGTPPEVASPASGSGAS
KLEREGQRPTQPVYQIQNRGMGAAASSGAVDPVIGQTKLVPPEKMKHSIKLVDDQMNWCD
SAMEYLRDQTDMLVVGVIGLQGTGKSTIMSLLSANAPEEDQRGYVFRAQTQEIKERGGNQ
STGIDFYITQERVIFLDTQPILSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQITAFLF
TVCHVVIVIQDWFTDINLYRFLQTAEMLKPSTPSASHDSTGSSGNEEGSEYYPHIVFLQN
KSSRDEFCPRNLKKMHMAVDKLMAHSHLKYKGTLSMLDCNIFPGLDRDYLETEVNMFLLP
LMENEGEDALTKAGSGSAPLFSLLPGYRGHPTFSSQVSKLRSQILAMSRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLQA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatctggccacagtcaacctggcatgtacggacagggaaggaggagaaggcga
cgcagagacagggatgtgggtcccccggggcaaaacctctctggtcccagtcgagatcgg
gaatatgtccccagagaacgcagggatggcagtgaggagcctccaggaccactccttcag
aagacccccatcatcctggccaaaccccctggagaacggtccaagccttcccagagtgta
cccaccagtggaggccaggccctggagaagcccatcatgctcatcaagtccagggaggac
ggggggaaaccagggacccctcctgaggtggcttctccggcctctggctctggggcctca
aagctagagagggagggccagcgccctacccaacctgtctaccagatccaaaacagaggc
atgggagcagctgcttccagcggtgctgtcgaccctgtgattggccagaccaagctcgtc
ccccctgagaagatgaagcacagcatcaagctggtggacgatcagatgaactggtgtgac
agcgccatggagtacctaagggaccagacagacatgttggtagtgggagtcattggcctg
cagggaacagggaaatccaccatcatgtctctcctgtctgccaacgcacctgaagaagac
caaaggggctatgtgttcagggctcagactcaggagatcaaagagagaggagggaaccag
agcactggtattgacttctacattacccaggaaagagtcatcttcttggacacacagccc
attctcagcccctccattttggatcacctcatcaacaacgaccgcaagctgcctccagag
tacaacctccctcacacctatgtggagatgcaatctcttcagatcactgccttcctgttc
acagtgtgccacgtggtcattgtgattcaagactggttcactgacatcaacctctacagg
ttcctccagacagcagagatgttgaagccctccaccccctcagccagccatgacagcact
ggttcttctggcaacgaagagggatcagagtactaccctcacatagtgttcctgcagaac
aaatctagtcgtgatgagttctgtcccagaaacctgaagaagatgcatatggcagtggac
aagctgatggcccactcccatctgaaatacaaaggcactttgtccatgctggactgtaat
attttccctggcctggaccgcgactacctggaaacagaggtcaacatgttcctgctgccc
ctcatggagaatgagggggaggacgctctaaccaaagcagggtctgggtccgcccctctc
ttctctctcctcccgggctacagaggacaccctaccttctcctctcaggtctccaagctc
cgcagccaaatcctggccatgtcccgctgtcagctgtcacacaccatcctcacagaaaag
aactggtttcactatgcagctcgcatctgggacggggtgaagaagtcctcagccctgtct
gaatacagccgtctacaggcctaa
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