Oncorhynchus nerka (sockeye salmon): 115140923
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Entry
115140923 CDS
T07952
Symbol
matn2
Name
(RefSeq) matrilin-2
KO
K19467
matrilin
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115140923 (matn2)
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
115140923 (matn2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FXa_inhibition
cEGF
VWA_2
EGF_CA
EGF
Matrilin_ccoil
EGF_LRP2
EGF_3
hEGF
Sec23_trunk
DUF4215
Plasmod_Pvs28
Spectrin_Anc-1_2
EGF_MSP1_1
Motif
Other DBs
NCBI-GeneID:
115140923
NCBI-ProteinID:
XP_029535248
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All DBs
Position
LG14:complement(6467569..6480493)
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AA seq
681 aa
AA seq
DB search
MRTLAFGLFCLLCCDAVRVDHRDRRRPRPSILSRGRNDSAIQSNSVESLCKGKPLDFVFI
IDSSRSVRPSDYEKVKIFITNILAFLDVGPEATRVGLLQYGSVVQNEFSLNSYRSKADVE
RAVKAMDHLATGTMTGLAIQYTMETAFTEPEGARPADMHIPRIAMIITDGRPQDTVEEVA
AQARQAGIQIFAIGVGRVDMNTLRVIGSEPHSEHVYLVANFSQIETLTSVFQSNLCGGTD
LCSVMDHQCDHLCVSTPASYMCRCRKGYTLNSDGKTCHVDDPCDVVDHGCAHICAKVPGV
LGYECRCRLGYELNEDKRTCRRIDYCDLGNHGCQHDCVSSPESYVCRCTRGYVLNRNGKT
CSKIDHCALGDHGCEHECVNTEDVFFCKCHEGYILRPDNKACKRLDPCSLGNHGCEHDCV
NTEDSFVCRCREGYKLRPDNRTCQKAVCGDGVMDLVFVIDGSKSLGPTNFELVKQFVNGI
VDSLDVSGTGIHVGLLQYSSKVRTEFILGQYTSGRDINRAVLRMQYMGRGSMTGAALRHM
FEYSFSAKEGARPDIPRVSIVFTDGRSQDDVSKWATKAKDAGITIYALGVGKAIEEELRE
IASEPDDKHLYYAEDFSNMEEITDKLKSRICKEKPSPQDMCKCENVMLFQRQVNEQLRRL
TQNIEVVSKRMKTLENQLGHK
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgaggactctggccttcgggctcttttgcctgctctgctgcgatgcagtccgagtggac
cacagagacaggcgccgtcccagaccatccatcctgtccagaggacgcaacgactcggcc
atccagtccaactcagtggagagcctgtgtaaagggaagcccctggattttgtgttcatc
atcgatagctcccgcagcgtgcgtcccagcgactacgagaaggtcaagatcttcatcacc
aacatcctggccttcctggacgtggggccggaggcgacgcgcgtcgggctgctgcagtac
ggcagcgtggtgcagaacgagttctccctcaacagctacaggagcaaggcagatgtggag
cgggcggtgaaggccatggaccacctggccaccggcaccatgaccggcctggctatccag
tacaccatggagacagccttcaccgagccagagggcgcccgacccgccgacatgcacatc
ccccgcatcgccatgatcataacggacgggcgcccccaggacacagtggaggaggtggca
gcacaggcccggcaggcgggcatccagatattcgccatcggagtgggcagggtggatatg
aacacgctgcgggtcatcgggagtgagccccactcggagcatgtgtacctggtggccaac
ttcagccagatagagaccctcacctccgtcttccagtccaatctgtgtggaggtacagat
ctgtgctctgtgatggaccatcagtgtgatcacctctgtgtgagcaccccagcctcctac
atgtgccggtgtagaaagggttacacccttaactctgatggcaagacctgccacgtggac
gacccgtgtgatgtggtggaccatggctgtgcccacatctgtgccaaggtgccaggggta
cttggctacgagtgtcgctgccggcttgggtatgaactcaacgaggacaagaggacgtgc
cgaagaatagattactgtgacctggggaaccatggctgtcagcatgactgtgtcagctct
cctgagtcctacgtctgtagatgcacgaggggctatgttctcaaccgcaatggcaagacc
tgcagcaagattgaccactgtgctcttggcgaccacgggtgtgaacacgagtgtgtgaac
actgaagatgtatttttctgtaaatgccatgaaggctacatactcagacctgataataaa
gcctgcaaaaggcttgatccatgttcccttggtaaccatgggtgtgagcatgactgtgtg
aacactgaagattcatttgtgtgtcgatgtcgagaaggctacaaactcagacctgataac
agaacctgccagaaggcagtgtgtggagatggagtgatggatctggtatttgtaattgac
ggctctaagagcctgggaccgaccaactttgagctggtcaagcagtttgtgaacggcatc
gtggactctctggacgtgtccggcacgggcatccatgtggggctgctgcagtactccagt
aaggtccgcacagagttcatcctgggtcagtatacctcaggccgggacatcaacagggcc
gtattgcggatgcagtacatgggcagaggatccatgacgggtgctgccctgcgtcacatg
tttgagtacagcttctctgccaaggagggggccaggcccgacataccacgggtcagcatc
gtgttcaccgacggacgatcccaggatgatgtgtcgaaatgggccactaaggcaaaggat
gctggtatcacgatatatgcacttggtgttggtaaagccatcgaagaagagctcagggaa
attgcttccgagccagatgataagcatttgtactatgctgaagattttagcaacatggaa
gaaattacagacaaattgaagtcacggatatgtaaagagaaaccctcccctcaagatatg
tgtaagtgtgagaacgtgatgctcttccagaggcaggtcaacgaacagcttaggagactg
acccagaatattgaggttgtgtcaaaaaggatgaagacccttgagaatcagcttggacac
aaatga
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