Oncorhynchus nerka (sockeye salmon): 115140926
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Entry
115140926 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase UBR5 isoform X1
KO
K10593
E3 ubiquitin-protein ligase EDD1 [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115140926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115140926
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115140926
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115140926
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
E3_UbLigase_EDD
MLLE
zf-UBR
Motif
Other DBs
NCBI-GeneID:
115140926
NCBI-ProteinID:
XP_029535254
LinkDB
All DBs
Position
LG14:complement(6511989..6556488)
Genome browser
AA seq
2916 aa
AA seq
DB search
MTSIHFVVHPLPGTEDQLNDRLREVSEKLNKYNFNSHPHLNLLEQATLKQCVVGPNHAGF
LLEDGRVCRISFAVQPDRLELTKPDGNDGSKLSGSGSGTGRSSRPGRTSDPPWFLSGSDT
LGRLAGNTLGSRWSSGVNGGSGGGGGGGSSSSVGGAGGGGVGGAVSGGGGGGGSSGRSST
AARDSRRQTRVIRTGRDRGSGLLGSQPQPVIPASVIPEELISQAQVVLQGKSRSVIIREL
QRTNLDVNLAVNNLLSRDDEDGDDGDDTASESYLPGEDLMSLLDADIHSAHPSVIIDADA
MFSEDISYFGYPSFRRSSLSRLGSSRVLLLPLERDSELLRERESVLRLRERRWLDGASFD
TERGSTSREGEPSLDKKNIPVQSPVSLGEELQWWPDKDGVKFVSIGSLFSELVAVSSKGE
LYQWKWSEPEPYRNTQNPSIRHPRVSFLGLTNEKITLLSANSIRATVATETNKVATWMDD
TLSSVASKLEHSAQAYPELQGERIVSLHCCALYTCAQLESSLYWWGVVPFSQRKKMLEKA
RAKNKKPKSSAGISSIPNITVGTQVCLRNNPLYHAGAVAFSVNAGIPKVGLLLESVWNMN
DSCRFQLRSPESLKNMDKTIKTQEIKTESKPELVKTEMGPPPSPASTCSDTSSIASSASL
PYKRRRSTPAPKEEEKVNEEQWPLREVVFVEDVKNVPVGKVLKVDGAYVAVKFPGTSSSV
STQPSQTSAPAPITDSDPSSLLQDCRLLRIDELQVVKTGGTPKVPDCFQRTPKKLCIPEK
AEILAVNVDSKGVHAVLKTGNWVRYCIFDLATGKAEQENNFPTSNLAFLGQSERNVAIFT
AGQDSPVILRDGNGTIYPMAKDCMGGIRDPEWLDLPPIASLGMGVHSLANLPTNSTIKKK
AAIIILAVEKQTLMQHVLRCDFDACRQYLVNLEQAVLLEQSPHVLHSFLGHRCDGNRNIL
HACVSVCFPVSNKETKEEEEAERSERNTFAERLSAVEAIANAISVVSSNSSGNRTGSSSS
RGLRLREMMRRSLRAAGLGRHESGPSSSDHQDPVSPPIAPPSWVPDPPPMDPDGDIDFIL
APAVGSLTTASTGTSQGPSTSTIPGPSSEPSVVESKDRKANAHLILKLMCDSMVLRPHLR
ELLSAKDARGMTPFMLAVSGRAYPAAITVLEAAQKMAKVGDPSMTEKVEADSVFMEMICP
TGTNPDDSPLYVLCCNDTCSFTWTGAEHINQDIFECRTCGLLESLCCCTECARVCHKGHD
CKLKRTSPTAYCDCWEKCKCKTLIAGQKAARLDLLYRLLTTTNLVTSPNSRGEHILLFLV
QTVARQSVEHCQYRPPRIREDRNRKAANAEDSDMPDHDLEPPRFAQLALERVLQDWNALK
SMIMFGSQENKDPLSASSRIAHLLPEEQVYLNQQSGTIRLDCFTHCLIVKCAPDITVSRF
IDTLLGTLVKELQNKYTLGRREEAVVVTRRFLRSVARVFVILSVEMASSKKKNNFIPQPI
GKCRRVFQALLPYAVEELCNVAESLIVPVRMGIARPTAPFTLASTSIDAVQGSEELFSVE
PLPPRPSPDQSSNSSQTASSYIIRNPQPRRSSQSQPVRGRDEEQDDIVSADVEEVEVVEG
VAGEEDHHEDQEEQGEENAEAEGQHDEHDEDEGDVLSSLGSDMELDLLAAAETESDSESN
HSNQDNASGRRSVVTAATAGSEAGASSVPAFFSEDDSQSNDSSDSDSSSSQSDDVDQETF
LLDEPLERTTTASHVNSAAQAPRSMQWAVRNTPSQRATGSAPSSSSTPAAASSTGLIYID
PSNLRRSSAISTSAAAAAAALEASNSSSYLTSASSLARAYSIVIRQISDLMSLIPKYNHL
VYSQYPAAVKLTYQDAVNLQNFVEDKLIPTWNWMVSIMDSTEAQLRYGSALSSAGDPGHP
SHPLHASQHSARRERMTAREEASLRTLEGRRSGRAATLLTVRQGMMSARGDFLNYALSLM
RSHNDEHSDVLPVLDVCSLKHVAYVFQALIYWIKAMNQQTTLDTTQMDRKRSREILELGL
DNEDSEHENDEDTNQSSTLQDKEDDTLPAEMGQNHPFFRRSDSMTFLGCIPPNPFEVPLA
EAIPLADQPHLLQPNARKEDLFGRPSQGLYSSSYTASKGLAEATLDRSCMEVNMGSSQIL
PTKMSYSANLKNVMSMETSQRGREDQPMDQELVAPKPGPSPHDLAAQLKSSLLAEIGLTE
SDGPPLPSFRPHCSFMGMVISHDMLLGRWRLSLELFGRVFMEDVGAEPGSILTELGGFEV
KESKFRREMEKLRNLQSRDLALEVDRDRDQLIQQTMRQLNTHFGRRCTTTPMAVHRVKVT
FKDEPGEGSGVARSFYTAIALAFLSNDKLPNLDCVQSVSKGMQASSTCHHDYNSSMTLNL
MQRLRNRDRERERRSGGLRAGSRRDRDSSRLANVSSTNLDRGSRSTDSCVDMTTGSEFRT
FKWIMDSRRQLSIDTRPFRPASEGNPSDEPDPLPAHRQALGERLYPRVHAMQPAFASKIT
GMLLELSPAQLLLLLASEDSLRARVEEAMELLIAHGRENGADSILDLGLLEAPEKAQQQE
NRKRHGSTRSVVDMELDDPEDGDDNAPLFYQPGKRGFYSPRPGKNTEARLNCFRNIGRIL
GLCLLQNELCPITLNRHVIKVLLGRKVNWHDFAFFDPVMYESLRQLIRHSQAGEADAVFA
AMDLAFAIDLCKEEGAGQVELLSGGVNMPVTPLNVYEYVRKYAEHRMLVVAEQPLHAMRK
GLLDVLPKNALEDLTAEDFRLLVNGCGEVNVQMLISFTSFNDESGTKTLARIHKESQREN
ADKLLQFKRWFWSIVEKMSMTERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLP
TANTCISRLYVPLYSSKQILKQKLLLAIKTKNFGFV
NT seq
8751 nt
NT seq
+upstream
nt +downstream
nt
atgacatccatacacttcgtggttcacccgttgcccgggactgaggaccagctcaatgac
agacttcgtgaagtgtcggagaaactcaacaaatacaactttaacagtcatccacacctc
aacctgctggagcaggccaccttaaaacagtgtgtagttggaccaaaccatgctggcttt
ctgcttgaggatggacgtgtgtgtcggatcagctttgctgtccagcctgatcgtctggag
ctgaccaaaccagatggcaacgatggttcaaagttgagtggcagtggttcagggacagga
aggagctccaggccaggcaggactagtgatcctccctggttcctgtctggctctgacaca
ctgggcagactggcaggcaacacccttgggagtcgctggagctccggggtgaacggtgga
tcaggtggaggtggcggcggtggcagcagcagcagtgtaggaggtgcggggggaggaggt
gtaggaggagctgtcagtggaggtgggggtggaggaggctcctctgggaggtcgtctaca
gctgccagggactcgagacgtcagaccagggtgatccgcacagggagggaccggggctct
ggtctcctgggcagccagccccagcctgtcatccctgcctcggtcatcccagaggaactc
atctcccaggctcaggtggtccttcaggggaagtctaggagtgtgatcatccgggagctc
cagaggaccaacctggatgtcaatctggccgtcaacaacctactgagcagagacgatgag
gacggtgacgatggcgatgacacagccagcgagtcctacctccctggagaggacctgatg
tccctgctggacgctgacatccactcagcccaccccagtgtcatcatcgatgctgacgcc
atgttctctgaggacatcagctactttggctacccctccttcagacgctcctccctgtcc
cgcctgggttcctcgcgagttctccttcttcccttagagcgtgactcagagctgttgcgt
gagcgtgagtctgtgttgaggttgcgggagcggaggtggctggatggggcctcatttgac
acagagaggggctccaccagccgcgagggggagcccagcctggacaagaagaacatcccc
gtccagagccctgtctctctgggcgaggagctgcagtggtggcctgacaaggatggtgta
aagtttgtgagcatcgggtccttgttctctgagctggtggcagtgagctctaagggggaa
ctctaccagtggaagtggagtgaaccagaaccatacagaaacacacagaacccttctatc
cgccacccccgagtgtccttccttggcctgaccaatgagaagatcaccctgctgtctgct
aacagcatcagagccaccgtggccacggagaccaataaggtggcgacctggatggatgac
accttgagcagcgtggcgtccaagctggagcacagtgcccaggcctaccctgagctgcag
ggggagcgcattgtgtctttgcactgctgtgccctctacacctgcgcccagttggagagc
agcctgtactggtggggtgttgtgccttttagtcaacggaaaaagatgcttgaaaaggct
agagccaagaacaagaagccaaagtcgagtgccggcatctcctcaatacccaacatcact
gtgggaacgcaggtgtgcctgaggaataaccccctctaccacgccggtgccgttgccttt
tctgtcaacgctgggatccccaaggtgggactgctcctcgagtctgtctggaacatgaac
gacagctgcaggttccagctgcgatcaccagagagcctcaagaacatggacaagaccatc
aagacacaggagatcaaaacggagagcaagccggagttggtaaagactgagatgggcccc
cctccttccccggcctccacctgcagtgacacctcctccatcgctagtagtgcctcgctg
ccctacaaacgaagacgctcgaccccggctcccaaagaggaggagaaggtgaacgaggag
cagtggcctcttcgggaagtggtgtttgtggaggatgttaaaaacgtccctgtgggaaag
gtgctgaaagtggatggtgcgtatgtagctgtgaagtttcctgggacatcaagcagcgtg
agcacacagccgagtcagactagtgctccagctcccatcactgactctgacccctcctca
ctgctgcaggactgtaggctgctcagaatagatgagttacaggtggtaaaaactggtgga
actcctaaagttccagattgcttccagcgtacacctaaaaaactctgcatcccagagaag
gctgagattctggctgtgaatgttgactccaaaggagtccacgcagtgctgaagactggt
aactgggtgaggtactgtatatttgacctggccacaggcaaagcagagcaggagaataac
ttccccaccagtaacctggccttcctggggcagagtgaacgcaatgtagcgatcttcacc
gctggacaggactctccagtcatccttcgggatggaaacggcacaatttacccaatggcc
aaagactgtatgggcgggatccgagaccctgagtggttggacctgccgcccatcgccagc
ctgggcatgggggtacactccttggccaacctccccaccaactcaaccatcaagaagaaa
gctgctattatcatattagctgtggagaagcagacgttgatgcagcacgtgctgcgttgt
gactttgatgcctgtcgtcagtacctggtcaacctggagcaggctgttctcctggagcag
agtccccacgttctccactccttcctgggccaccgctgcgacggcaaccgcaacatcctc
cacgcctgcgtctccgtctgcttcccagtcagcaacaaggagaccaaggaggaggaagaa
gctgaacggtctgagaggaatacgtttgcagagagactgtcagcagtggaggccatcgcc
aacgcaatctccgtggtgtctagcaacagctctgggaacaggacgggctcttctagcagc
agagggctgcgtctgagggagatgatgaggcgctctctgagagcagcggggcttggccgt
cacgagtctggcccctcctccagcgaccaccaggaccctgtgtccccacctatcgcccct
cccagctgggtgcctgacccccctcccatggacccagatggtgacatagacttcatcctg
gcccctgcagtgggatctctcaccacagcctcaacagggaccagccagggccccagcacc
tccactataccaggcccctcctccgagccttcagtggtggagtctaaagaccgcaaggcc
aacgcccacctcatcctcaaactgatgtgtgacagcatggttctgaggccacacctccgc
gagctgctatccgccaaggatgcccgtggaatgaccccgttcatgctggcagtcagcggg
agagcttacccagctgccattactgttctggaggctgctcagaaaatggccaaggtggga
gaccccagcatgactgagaaggtggaagcagactctgtgttcatggagatgatttgtccc
acggggaccaaccctgacgactctcctctctacgtcctctgctgcaacgacacctgcagc
ttcacctggacaggagctgaacacatcaaccaggatatctttgagtgtcggacctgcggc
ctgttggagtcactctgctgctgcactgagtgcgccagggtgtgtcacaaaggacacgac
tgcaaactcaagaggacctctcccactgcgtactgtgactgctgggagaagtgtaagtgt
aagacactaatcgctggacagaaagctgctcgcctggacctactgtacagactgctcacc
accactaacctggtcaccagtccaaacagccggggggagcatatccttctgttcctggtg
cagactgttgctaggcagagtgtggagcactgccaataccggccccctcgcatcagagag
gacaggaaccgcaaggctgccaatgctgaagactctgacatgccggaccatgacctggaa
cctccacgcttcgcccagctggccctggagagggtgctgcaggactggaatgctctcaag
tccatgataatgttcggatcccaggagaataaagacccgttgagtgccagcagccgtatc
gcccatctccttccggaggagcaggtgtacctgaaccagcagagtggcaccatccgcctg
gactgcttcacacactgcctcattgtcaagtgtgcccctgacattacagtaagtcggttt
attgacaccctgctggggaccttggtgaaggagctgcagaacaagtacactcttggccgg
agagaggaggccgtcgtcgtcaccaggaggttcctgcgctccgtggccagggtgtttgtc
atcctcagcgttgagatggcttcgtccaaaaagaaaaataacttcatcccccagcccatt
gggaagtgcaggcgtgtgttccaggccctgctgccctatgcggtggaggagctgtgcaac
gtggcggagtcgctcatcgtgcctgtgaggatgggcatcgcccggcccactgcccccttc
accctggccagcaccagcattgacgccgtgcagggcagcgaggaactcttctctgtggaa
cccttgccaccgagaccctccccagaccagtccagcaattctagtcagactgcatcgtcc
tacatcatcaggaacccccagcctcgccgcagcagccagtcccagccggtcagagggcga
gacgaggagcaggatgacattgtgtctgctgacgttgaagaggtagaggttgtcgagggc
gttgccggggaggaggatcaccatgaagaccaagaggaacagggagaggagaacgctgag
gcagagggacagcatgatgaacatgatgaggatgagggggatgtcctttcctctctagga
agcgacatggagttggatctgctggctgctgcggagacggagagtgacagcgagagtaac
catagcaaccaggacaatgccagtggtcggaggagtgttgtcaccgcagcaactgccggc
tccgaagcaggtgccagcagtgtccctgctttcttttcagaggacgactcccagtccaac
gactcgagcgactcggacagcagcagcagccagagcgatgacgtggaccaggagaccttc
cttttggacgagcccttggagaggaccaccaccgcctcgcacgtcaacagtgctgcccag
gcgccacgctccatgcagtgggctgtacgcaacacccctagccagagagccacgggcagc
gccccctccagctcctccacccccgctgcagcgagctccacaggtctgatctacatcgac
ccgtccaacctgcggcgcagcagtgccatcagcactagcgcggccgctgcggctgcagct
ctggaggcctccaactcgtccagctacctgacgtcagcctccagcttagcccgggcctac
agcattgtcatcagacagatctctgacctgatgagcctcatccccaagtacaaccacctg
gtctattcccagtaccctgctgcagtcaaactcacctaccaagacgctgtcaacctgcag
aactttgttgaggacaagctgatccctacgtggaactggatggtgtccatcatggactct
acagaggctcagctgcgttacggctcggccctgtcctcagcaggtgaccccggacaccca
tcccaccccctccacgcctcgcagcactccgcccgcagggagcgcatgacagcccgcgag
gaagccagcctccgcaccttggagggacgcaggtctggacgtgctgccactctgctgaca
gtgcgtcaagggatgatgtcagcacggggagacttcctgaactacgccctgtctctgatg
cgttcccataatgacgagcactctgacgttctgcctgtgctggatgtgtgttctctcaaa
cacgtggcctacgtcttccaggccctcatctactggatcaaagccatgaaccagcagaca
actctggacacaacacagatggaccgcaagaggagccgagagattctggaactgggactg
gacaatgaagattctgaacatgagaatgatgaggacaccaatcaaagttccacgctccag
gataaggaggatgacactctccctgctgagatgggacagaaccacccgttcttccggcgc
tctgactccatgaccttcttgggctgtatcccccccaaccccttcgaggtccccctggct
gaggccatccccctggcagaccagcctcacctcttgcagcccaatgcaaggaaggaggat
ctgtttggccgtcctagtcagggcctgtactcgtcctcgtacacagcaagcaaaggcctg
gccgaggccaccctggaccgcagctgcatggaggttaacatgggctcctctcagatccta
cccactaagatgtcctactcagccaacttgaagaacgtgatgagtatggagactagtcag
cgcggccgagaggaccagcccatggaccaggagctagtggctccaaagccaggcccctca
ccccacgacctagctgcccagctgaagagcagcctcctggctgaaataggtctcactgag
agtgatggccccccgctcccttcctttagaccccactgtagtttcatggggatggtgatc
tcccatgacatgctgctgggccgctggcgtctgtctctggagctgttcgggcgcgtcttc
atggaggatgttggagcagagcctggatcgattctgaccgagctggggggttttgaggtg
aaggagtctaagttccgccgggagatggagaaactccgtaacctccagtcccgtgacctg
gccctggaggtggaccgtgaccgtgaccagctgatccagcagaccatgaggcagctcaac
acccactttggacggcgctgcaccaccacacccatggctgtgcaccgcgtcaaggtcacc
ttcaaggacgagccgggcgagggtagtggcgtggcccgtagcttctacacggccatcgcc
ctggccttcctgtccaatgacaagctgcccaacctggactgtgtgcagagcgtcagcaag
ggcatgcaggccagcagtacgtgtcatcacgattacaactcaagtatgacattgaatctg
atgcagcggctgaggaacagagaccgggagagggagcggaggagtggaggactccgagcc
ggctctaggagagaccgagacagctcccgtttggctaatgtctcttctaccaaccttgat
cgcggttcccgcagcactgacagctgtgttgacatgacaactgggtcggagttccgaacc
ttcaaatggatcatggactcgaggagacagctgtccattgacacccggcccttcaggcca
gcctcggagggaaaccccagtgatgaacctgaccccctgcctgcccacagacaggccctg
ggagagaggctgtacccccgcgtccacgctatgcagccggcgtttgccagtaagatcact
gggatgctgctggagctctccccagcccagctgctcttgctcctggccagtgaggactct
ctcagggccagggtggaggaagccatggagctgctcattgcacatggaagggaaaatggt
gctgacagcatactggacctgggtctcctggaggctcctgagaaagcacagcagcaggag
aaccgtaagcgtcatggctccacccgcagtgtggtggacatggagctggacgaccctgaa
gacggagatgacaacgctcccctgttctaccagcccgggaagagaggcttctactctccc
cggcccggcaagaacacagaggccaggctcaactgcttcaggaacatcggcagaatacta
gggctgtgtctgctgcagaatgagctctgtccaattactttgaacagacatgtcatcaag
gtgctgctcggcagaaaggtgaactggcatgactttgccttctttgacccggtaatgtac
gagagcctgcggcagttgatccgtcactctcaggctggagaggcggacgctgtgtttgca
gccatggacctggcctttgccatagacctgtgtaaggaggaaggggctggacaggtggag
ctgctgtcaggtggggtcaacatgcctgtgactcctctcaacgtttacgaatatgtgaga
aagtacgctgaacacaggatgctggtggttgccgagcaacctcttcatgcaatgaggaag
ggtctgttggatgtccttcctaagaacgccctggaggacttgacagctgaggacttcagg
ctgctggtcaatggctgtggagaggtcaacgtgcagatgctcatcagcttcacttccttc
aatgatgaatctggtacaaagaccttggcccgtattcacaaagaatctcagagggaaaat
gcagataagttgttgcagttcaaacgctggttttggtccattgtggagaagatgagcatg
actgagaggcaagatctggtgtacttctggacctccagtccgtctctgccagccagtgag
gaaggcttccagcccatgccctccatcaccatcaggcctccggatgaccagcacctgccc
acggccaacacctgcatctcgcgtctctacgtgccactctactcctccaaacagattcta
aaacagaaactcttactagccattaagaccaagaactttggttttgtgtag
DBGET
integrated database retrieval system
