Oncorhynchus nerka (sockeye salmon): 115140946
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Entry
115140946 CDS
T07952
Name
(RefSeq) valine--tRNA ligase-like isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
115140946
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
one01007
]
115140946
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
one03016
]
115140946
Enzymes [BR:
one01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
115140946
Amino acid related enzymes [BR:
one01007
]
Aminoacyl-tRNA synthetase
Class I (U)
115140946
Transfer RNA biogenesis [BR:
one03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
115140946
Prokaryotic type
115140946
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
GST_C_2
Arc1p_N_like
GST_C_3
tRNA-synt_1e
Jag_N
DACNG
Motif
Other DBs
NCBI-GeneID:
115140946
NCBI-ProteinID:
XP_029535322
LinkDB
All DBs
Position
LG14:7356996..7372902
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AA seq
1279 aa
AA seq
DB search
MASLYVSPHPDDFRSLMALVAAEFCPSRLCTLIEDPPASLALCSRPSLVLGSGGGEVLSG
ASAVAWYLASQGKRIGSNAKQESQVWQWLSFADNELTPVSCAVVFPLLGVMGVDKKSMQL
QQSSHAEMMRVLNVLDKNLEPRTFLVGDSLTLADIAVATAALLPFKYALEPSNRRALTNV
TRWFLTCVNQPQFVKVLGQISLCEKMVPVTPKPSVAPVLAANANPTADANATNGKPKTEA
QLKKEAKNREKLEKFQKKKEMEEKKKQEKKLAPPTEKKAKPEKKDLGVISYDVPTPHGEK
KDVLSPLPDSYSPQYVEAAWYSWWEKQGYFKPEYGRKSISEPNPRGVFMMCIPPPNVTGS
LHLGHALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMRERGLSRHDLGR
DQFIQEVWKWKNEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSYAVQEAFIRLHEDGVIY
RSKRLVNWSCTLNSAISDIEVDKKELTGKTLLPVPGYKDKVEFGVLVSFSYKIEGSDEEV
IVATTRIETMLGDSAVAVHPADPRYQHLKGKMVLHPFCDRKMPIVFDEFVDVNFGTGAVK
ITPAHDHNDYEVGNRHNLAFINILDENGLLINVPAPFLGMKRFEARKAVLQALKDRGHFK
ETKDNPMVVPVCSRSKDIVEPLLKPQWYVDCADMGKQAADSVREGRLKIIPDHHHKTWFN
WLDNIRDWCISRQLWWGHRIPAYFVTVTDPSVTPGEDMDGHYWVSGRTEEEARDKAAKRF
NVPTDKITLRQDEDVLDTWFSSGIFPFSIFGWPNETQDLSVFYPGTLLETGHDILFFWVA
RMVMMGLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGISLEGLYAQLQD
SNLDPVEVEKAKQGQKSDYPTGIPECGTDALRFALCAYTSQGRDINMDVNRILGYRHFCN
KLWNAVKFAMRTLGDNFVPSEKAQLCGEESVSDRWILSRLCSAVGLCNAGFQAYDFPAIT
TAIYNFWLYELCDVYLESVKPVFSRAEEDSGSRSQAVVCRQTLFTCLETGLLLLAPIMPF
VGEELYQRLPRRRSQDGHPSIHVTPYPETEEFCWHSEDVDRQMEFVMTVVRTIRSLRADY
NLTKTRADCYLQCIDSETMSLVEQYSLQIQTLSLSQTIQPVPATGAVPEGCAVAIASDRC
TVHLMLKGLIDLEKEVTKLTVKKGELEKQMDKLREKMEKSDYKEKVPVKVQDLDAEKLRQ
SQTELEKATEAIDNFKRMV
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgctctacgtctccccccaccctgacgacttcaggagcctcatggccctggtc
gctgcagagttctgcccctctcggctctgcacactcatagaagaccctcctgcctccctg
gccctgtgctctcgccccagcctggtgctgggctctgggggaggtgaggtgctctctggg
gccagtgctgttgcatggtacctagcctctcaggggaagaggatagggtcgaatgctaaa
caggagagccaggtgtggcagtggctcagctttgcagacaatgagctgactcctgtgtcc
tgtgctgtggtgttcccactgctgggggtgatgggagtggataagaagtccatgcagctt
cagcagagttctcatgctgagatgatgcgcgtgctaaacgttctagataagaacctggaa
cctagaacattcctggtgggagacagcctcactctggctgacatcgctgtggcaaccgca
gcactcctgcccttcaaatatgccttggagccgtccaacaggagagccctgacgaacgtg
accaggtggtttctgacatgtgtcaaccagcctcagtttgttaaggtcctgggacagatc
tctctgtgtgagaagatggtgcccgtcacacccaaacccagcgttgctcctgttcttgct
gctaacgctaatccaactgctgatgccaacgctaccaatggcaaaccaaagacagaagct
cagctgaagaaggaggctaaaaaccgagagaaattggagaagttccaaaagaagaaggag
atggaggagaagaaaaagcaagaaaagaaactggcacccccgacagagaaaaaggccaaa
ccagagaagaaggacttgggagtgatctcatacgacgtccccacccctcatggagagaaa
aaagacgtcctgagccccctgccagactcgtacagtcctcagtacgtggaggcagcctgg
tactcctggtgggagaagcagggatacttcaaacctgagtacgggcggaagagtatcagt
gagccaaacccccgtggagtgttcatgatgtgtatccctccgcccaatgtaacgggatct
cttcacttaggccatgccctaaccaacgccatccaggactgtctgaccagatggcaccgt
atgcgtggcgagacgaccctgtggaacccaggctgtgaccacgcgggcatcgccacccag
gtggtggtggagaaaaaactgatgagggagaggggcttgagccgtcacgacctggggaga
gaccagttcatccaagaggtctggaagtggaagaacgagaagggagaccgtatctaccac
cagctgaagaagctgggttcctctctggactgggacagagcctgcttcaccatggaccct
aaactgtcctatgcagtccaggaggcgttcattcgtctgcatgaggacggcgtgatctat
aggagcaagaggctggtcaactggtcatgcaccctcaactctgccatctcggatatagag
gtggataagaaggagctgactggcaagactctgctgcccgtgcctggctacaaggacaag
gtggagtttggagtactggtctccttctcctacaagatagagggatcagatgaggaggtg
attgtggcgaccactcgtatagagaccatgctgggagattctgctgtggccgtccaccct
gccgaccccagataccagcaccttaaagggaagatggtgcttcatcccttctgtgacagg
aagatgcccatcgtgtttgatgagttcgtggacgtcaactttggaacgggtgctgtgaag
atcaccccagcccatgaccataatgattatgaggttggaaacagacacaacctggccttc
atcaacatcctggatgagaatggcctgctcatcaacgtgccggctccattcctgggtatg
aaacgtttcgaagcgaggaaggctgtgctgcaggctctgaaggacagaggccatttcaag
gagaccaaagataaccccatggtggtgcctgtctgcagtcgttctaaggacatagtggag
cccctgttgaagcctcagtggtatgtggactgtgctgacatgggcaagcaggcagctgac
tcggtccgggagggaagactcaaaatcatcccagaccaccaccataagacctggttcaac
tggttggacaacatcagggactggtgtatctctcgtcagctgtggtggggtcacaggatc
ccagcctactttgtcaccgtgactgacccttcagtcacaccaggagaggacatggatggt
cattactgggtgagtgggaggacagaggaggaggccagagataaagctgccaagcgcttc
aacgtccccactgacaagatcaccctccgacaggatgaggatgtcctggatacatggttc
tcctctggtattttccccttctccatcttcggctggcccaatgagacccaggacctgagt
gtgttctatccaggcaccctgctggagacgggtcatgacatcctgttcttctgggtggcc
cgcatggtgatgatgggcctcaaactcactggcaagctgcccttcaaagaggtgtacctc
catgcggtggtgagggacgcccacgggaggaagatgagcaaatctctggggaacgtcatc
gaccccctggacgtcatcacaggcatctctctggagggtctgtatgcccagctgcaggac
agtaatctggacccagtagaggtagagaaggccaagcagggacagaagtcagactacccc
actggtatcccagagtgtggcacagatgccctccgcttcgccctgtgtgcctacaccagc
caaggcagggacattaacatggatgtgaatcgtatccttggttaccgtcacttctgtaac
aagctgtggaatgctgtgaagtttgccatgaggacgctgggagacaactttgttccttca
gagaaagcccagctgtgtggggaggagagcgtgtcagaccggtggattctgtcccgtctg
tgttctgctgtgggtctgtgtaatgcagggttccaggcctacgacttcccagctatcacc
acagccatctacaacttctggctctacgagctctgtgacgtctatctggagagtgtgaag
ccagtgttctccagggcggaggaggacagtgggtctcggagccaggctgtagtctgcaga
cagacgctgttcacctgcctggagaccggcctgctcctcctagctcccatcatgcccttt
gtgggcgaggagctctaccagaggttgccacggcgacgatcccaggatggccaccctagt
atccatgtcacgccctaccctgagactgaggagttctgctggcacagtgaggatgtggac
cgtcagatggagtttgtgatgaccgtggtccggaccatccgttcactcagggccgactac
aacctgaccaagacacgtgccgattgctacctccagtgtatagacagtgagacgatgtct
ctggtggagcagtacagtctgcagatccagaccctgtctctatcccagaccatccagccc
gtcccagccaccggggccgtcccagagggctgtgctgtggccattgcctccgacaggtgc
accgtccacctcatgctcaagggtctgatagatttggagaaggaggtgaccaagctgact
gtgaagaagggagagctggagaaacagatggataaactgagagaaaagatggagaagagt
gactacaaggagaaggtgcctgttaaagtacaggatctggacgctgagaagctgcgtcag
agccagacggagctggagaaagcaacggaagccatagacaacttcaagagaatggtgtaa
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