Oncorhynchus nerka (sockeye salmon): 115140964
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Entry
115140964 CDS
T07952
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase MINDY-3-like isoform X1
KO
K22647
ubiquitin carboxyl-terminal hydrolase MINDY-3/4 [EC:
3.4.19.12
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115140964
Enzymes [BR:
one01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
115140964
Ubiquitin system [BR:
one04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
MINDY
115140964
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MINDY-3_4_CD
EF-hand_7
EF-hand_6
Motif
Other DBs
NCBI-GeneID:
115140964
NCBI-ProteinID:
XP_029535354
LinkDB
All DBs
Position
LG14:8445149..8503561
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AA seq
472 aa
AA seq
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MGELNKEVVDLVWKRPGSNGVSASLFRRWTQGLVFSETEHTALEQFEGGPCAVIAPIQAF
LLKNILFNRESSNWRHITEEEQKAALCSTLAEILEQACSTSSTTSFCLVTWAKGQCPHTT
THTPLTGGPETSQTPQDQQPTALADEDLGFERFHSILQKRIVKSLSELREEVVSLYETWK
GRCGVLFFLYSVILTKGIVNIRNEIEDTTEPLVDPVYGHGSQSLVNLLVTGHAVSNVWDG
DRECSGMKLHGIHNQTSVGFLTLMESLRYCKVGAFLKSPKFPIWILGSETHLSVFFAKEM
CLVAPESPSEQARRVFQTFDPEDNGFIPDSLLEEVMKALDLVSEPEYYVSLMKSKLDPEG
LGIVLLAPFLLEFFPDQTGTLWQGTMAEEWESERQRERKDTGIPDSFPVYHYNGLKQSNH
NERVEYVQGSALVLGLEDPMVRTDDTPVKRCLQTKWPYIELLWNTDRSPSLN
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgggggagttaaataaagaggttgtggatctagtttggaaaagaccaggcagcaacggg
gtgtctgcttcactcttccggagatggacccaagggttggtcttcagtgagacagaacac
acagcactggagcagtttgaaggaggaccctgcgctgtcattgctcctatacaggccttc
cttctgaagaacatcttgtttaacagagagagttctaactggagacatatcacagaggag
gagcagaaagcggccctgtgttctactctggctgagatcctggaacaggcctgctctact
tcctccactacctccttctgcctggtgacctgggccaaaggacagtgcccccacactacc
actcatacacccctcacagggggtccagagaccagccagaccccgcaagaccagcaaccc
actgctttggctgatgaggatcttggctttgagcggtttcacagcatcctccagaagcgt
attgtgaagtcattatcagagcttagagaggaggtggtgtctctctacgaaacctggaaa
gggcgctgtggagtcctgttcttcctctactctgtcatcctcaccaaggggatagttaac
atcaggaatgagattgaagatactacagagcctcttgtagatccagtctatggccacggc
agtcagagtctggttaacctgttagtgacgggccatgctgtctctaatgtgtgggatgga
gacagggagtgctctggcatgaagctccatggtatccacaaccagacatccgtgggcttc
ctcactctcatggagtcactacgctactgcaaggtgggtgcgttcctgaagtctcctaag
ttccctatatggatccttggcagtgagactcatctctcagtgttcttcgccaaggagatg
tgtctggtggctcctgagtctccatctgaacaggccaggagagtcttccaaaccttcgac
ccagaagataacggctttattccagactctctgttggaggaggtgatgaaggcactagac
ctcgtctcagaacctgaatactatgtgagtctgatgaagagtaagttggatccagagggc
ttggggatcgtgctgctggctccgttcctcctggagttcttccctgatcagacagggact
ctgtggcagggaaccatggctgaagagtgggagagcgagaggcaaagagaaagaaaggat
actggaatcccagactccttccctgtctaccactacaatggcctgaaacagtccaaccac
aacgagagggtggagtatgtgcagggttcagccctggtcctgggcttggaggaccccatg
gtgaggacagatgacactccagtgaagcgctgcctccagaccaagtggccctacatagaa
ctgctgtggaatactgaccgctccccttcacttaactaa
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