Oncorhynchus nerka (sockeye salmon): 115140985
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Entry
115140985 CDS
T07952
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115140985
Membrane trafficking [BR:
one04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
115140985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
SPA
ARM_UBP24_USP9X-Y
Motif
Other DBs
NCBI-GeneID:
115140985
NCBI-ProteinID:
XP_029535391
LinkDB
All DBs
Position
LG14:complement(9111901..9164533)
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AA seq
1501 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAELSTGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWYVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRESLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKHGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDQPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPVRQWQKSGSVGSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLRNPGANG
CSGPASRKPPVGPRDTSTPSPFPPSGVVVRRDQVCLSTFYKDCAEMADSDPDCSCQPGER
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLTGKLQQLLTPTRHRVSGRRATSVDARRSG
GENGPVSRVSEQRQSRKAQVAESLLKAKERLYNATSESSLSVGSDVDLPDTTNLAFPLRK
SWDTNQEGAGLQVLMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPVSSTHHSLERTNWNTEEEVESAAKPPGGQEVILGHNGVSEDSSSETSSYSES
SSATMGSSVGESPQVTVAYLSPLVLRKELESLLENEGEAVLAQGQLLDSHSIIFWNLVWY
FHRLGLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDHWPPLYILWRIHSG
VPMRNHSWRRHNHPFTLAFLEEVLRWVGMNEIHKGITLFLETIAKQPGTPKIQRSLYREM
LFLTLAAMGRDHVAAFDKKYKAAYQRLSGSLGRGELRRKRAQPPSPKAVDCRRSFLLPLE
C
NT seq
4506 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcctgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgagctgagcaccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggtatgtgatcgagactaccccc
tacagccgctcagccagcctgagctccggggggcccgccacccaccgcaccttcctgact
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagtaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aatgccctagtctatgaagcaggtctgatcagtcgttatcctgaagcggacgtggagtca
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacacaaagtaccagctccctgtcttctctaccttcgtcctcactagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagagc
ctctcggagcggcagagcgtccgtcttggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagtgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcacctttgtctaccgatactccatctctggaccccacgtg
ctacccctcgagaagcacatctccagcttcatgcacaacgtcccgttcccttcccctcag
cggcctcgcatcctagtgcagctctccccctatgacaaccttctcctctgtcagcctgtc
tcctcccccttactgctcagtggtgctagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggccgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgttctcacctccgtcagcgaggctctggtgtctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcatcgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacaccatctttcaagcagaggacaagaagccg
ttgtcatggcgatcgctaccaaggaagcatggcaagatgctggtgaataccctcaccaac
ttgatgaagactctggagaaaatctacaccactggccaagaggaggccaccctggagttc
ctgctgacggactatgacctgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgcttcatgagctgcttgctgaggggctaccgtgcctacctgctgccc
atcacccaggccccctcagacaggaccaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggacgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagacggttcagaatgccccactcactacagctatgagacgttccctgtg
ctctgcatggatctgtttgaccagcctcaggaccagctacgtgtccctaccaaggggagt
gcccccagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacggcatatgaggtgctcaagcacatggagaccaggaaggtggtactaccggat
gaggtgtgttacaggatcctgatgcagctgtgtgggcagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctctaccaatcagggtggccgtcta
cgctgggccaagttgcgtaacgttctgatggccgtggcgcagttcagacagccagtcaga
caatggcagaaaagtggttcagtaggctcgcggacagatacaatggacagtaaccaacga
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcttgaacagcatgagaggc
tcaacagacaagtctaagctctcaatgaaggcggtgctccggaacccaggtgccaatggc
tgcagcggtcccgcctcccgtaaaccccccgtggggccacgagacacctccaccccttct
ccctttccccctagtggtgtcgtggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagatggccgactctgaccctgactgcagctgccagcctggggagaga
gatggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactac
aacaatgtgtcaccaccgagtcggggcagcctgacggggaaactgcagcagctgctcacg
cctactcgccatcgagtctcagggcggcgggccaccagtgtagacgcccggcgctcgggg
ggagaaaacgggcctgtgagccgggtgtcggaacagagacagtcccgaaaagcccaggtg
gctgagagcctactgaaggctaaggagaggctctacaatgctacctctgagagttctctg
tcggtggggagtgacgttgacctccctgacaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagaaggagcgggactacaggtgttgatgtcgagctgctccttg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacctgtcagcagcactcaccatagcctggaacgtaccaac
tggaacacggaggaggaggtggagagcgcagccaagccccctggtggccaggaggtcatc
ctgggtcacaacggtgtgagtgaggactccagttctgagaccagcagttattctgagagc
agcagcgctaccatgggttcatcggtgggcgagtctccccaggtgacggtggcctacctg
agcccattggtgctgcgcaaggagcttgagagcctgctggagaacgagggcgaggcggtg
ctggcacagggccagctcctggacagccactccatcatcttctggaacctagtgtggtac
ttccatcgcctgggcctgcccagcaacctgctgcagctggttcgctcctcaccgctggcc
aaccaactagcacagacttcagagaactcagcagtgagggtgaggctgctgtgggacaca
ctgacccctgacacagaccactggccccccctctacatcctgtggaggatacacagtggc
gtacccatgcggaaccacagctggcggaggcacaaccaccccttcactctggccttcctg
gaggaagtgctgcgctgggtcggcatgaacgagatacacaagggaatcaccctcttcctg
gaaaccattgctaagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatg
ctcttcctcacgctggctgccatgggtagagatcacgttgctgcgtttgataagaaatac
aaggctgcgtaccaacggctgagtggctccttggggcgtggggagctccgcaggaagcga
gcccagccacctagccccaaggctgtggactgcagacggagcttcctgctgcccctcgag
tgctga
DBGET
integrated database retrieval system
