Oncorhynchus nerka (sockeye salmon): 115141047
Help
Entry
115141047 CDS
T07952
Name
(RefSeq) GA-binding protein subunit beta-1-like isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115141047
03029 Mitochondrial biogenesis [BR:
one03029
]
115141047
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
115141047
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
115141047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Ank_KRIT1
Borrelia_P83
ANK_LRRK2
TFIIA
Motif
Other DBs
NCBI-GeneID:
115141047
NCBI-ProteinID:
XP_029535489
LinkDB
All DBs
Position
LG14:10676936..10684230
Genome browser
AA seq
482 aa
AA seq
DB search
MSLVDLGKRLLEAARAGLDNDVRTLMVNGAPFTTDWLGTSPLHLAAQYGHHSTAEVLLRA
GVSRDARTKVDRTPLHMAATEGHSNIVELLVSQSGADINAKDMLKMTALHWAAQHGHREV
AELLLKYGADVHSLSKFDKTPFDIAMDTSNTELMILLQDGMQNQVNMNPEPQFIISSAGV
VNLSDLVNTTAKSGMGNWSTGYRDSVSTTSVLATLAALAEASGPMGNNAGKSEDAIAADS
VDSAIQHVVGDGGQRVITIVTDQHGNLQPAGLGQQFFVTMQGQQMVAVPAGQITEEVVEQ
EPYPSLARKRRIEPAVILTRPKEKKAKSGDSSREQLQKQLQEANRKAQEYRTQLLQKEQE
AEQYRLRLEEAIEQQQSNNTSNATCSTCTGVQEVEEVEEEVVQIEKQHETEERVVEEDKV
EGEEDVPFLEDTILVKVEEELDSGEGEQITVDETEETEKASTKVTTTPKRGRGRGRGRGR
RR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtcactggttgacctggggaagcggctgctggaggctgcacgggcagggctggataat
gatgtcaggaccctcatggtcaatggagctcccttcaccactgattggctggggacatcc
ccgctccatctagcggctcagtacggacaccactccactgctgaggtgctccttcgagca
ggcgttagcagggatgcccggaccaaagtggacaggaccccgctccatatggcggccacg
gagggccactccaatatagtggagctgctagtcagtcagagcggagcggacatcaacgct
aaggacatgctgaagatgacagccctgcactgggcggcccagcacggtcacagagaggtg
gcagagctgctgctcaaatatggagcagacgtccactccctcagcaagtttgacaagacg
ccctttgacattgccatggacaccagcaatactgagctcatgatactgttacaggatggc
atgcagaaccaagtgaacatgaacccagagccccagttcataatttcctctgctggggtc
gtgaacctctctgacctcgtcaacaccaccgccaagtcaggtatgggcaactggagcact
ggttacagagactctgtctctaccacctcagtcctggcaacactggcagccctggcagaa
gcatccggtcccatgggtaacaatgcaggcaaatctgaggatgcgatcgctgcagattct
gtggactcggccattcagcatgtagtgggtgatggaggtcagagggtcatcaccatagtg
acggaccaacacggcaacctgcagccagcgggacttggacagcagttctttgtcactatg
caggggcagcaaatggtggcagtcccggctggtcagatcacagaggaggtggtggaacag
gagccttatccctctctggcacgcaagaggagaatagagcctgcagtcatcctaaccaga
cccaaagaaaagaaagcgaagtcaggggacagcagccgggagcagctccagaagcagttg
caggaggccaaccggaaggcccaggagtaccgcacacagctcctacagaaggagcaggag
gctgagcagtaccgcctccgactagaggaggccatagagcaacagcagagcaacaatacc
agcaatgctacttgttctacctgcacaggtgtccaggaggtagaggaggtagaggaggag
gtggtccaaatagaaaaacaacatgagacagaggagagagttgtagaggaagacaaagtg
gaaggggaggaggacgtcccatttctggaagacaccattctggttaaagtggaggaggag
cttgattcaggggagggagaacagataacagtggatgagaccgaggaaacggagaaggct
tcaactaaggtcacaacaacccccaaacgggggagagggaggggacgaggacgtgggagg
aggcggtag
DBGET
integrated database retrieval system
