Oncorhynchus nerka (sockeye salmon): 115141105
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Entry
115141105 CDS
T07952
Name
(RefSeq) high affinity nerve growth factor receptor-like isoform X1
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04020
Calcium signaling pathway
one04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115141105
04020 Calcium signaling pathway
115141105
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
115141105
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
one01001
]
115141105
Enzymes [BR:
one01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
115141105
Protein kinases [BR:
one01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
115141105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
LRRCT_2
Ig_3
LRR_8
ig
Ig_2
TrkA_TMD
LRR_5
C2-set_2
Atypical_Card
C2-set_3
CFC
Motif
Other DBs
NCBI-GeneID:
115141105
NCBI-ProteinID:
XP_029535591
LinkDB
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Position
LG14:12026491..12051332
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AA seq
808 aa
AA seq
DB search
MAVVVGSAPWVAPMALVLLAITLAVPALGGCPSACRCSFAMLQCLEPNGIATIPALALQE
SENVTEIYIENQADLENITEVDLANYRELKNLTVTFCRLAYISANAFQHNLKLQYVNLAS
NSLEHISWKVFHFLPLLNLVLRDNPLECSCDIHWLQQWQLNDHSDLDNQPLQCFSNGHAL
QLDSVEMENCTVPDVAIVHANTKVQEGGNLTFVCQVTGVPVPVVRWRTNKLLSRYTVQER
FWGSTLELELQLWNMSSEDNLHNLTCEAENRAGPGEEKVTLDIEFPSKIIFLHNAEQQHH
WCFPFKVDGNPEPSIRWLFNGSNLTEGLYTYTQLIPDSDDGSVKHGCLFLNKPTHLNNGL
YTIIVGNRLGVDQATATGMFMDNPFDPFDPEGIIPVLEESDPLPTNKSNEDVTENTESRV
FGVSVAVGLAVFACAFLLMMVLVINKCGQQSKFGIHRSSVLGTEDDLAVSLRFMNFGTSP
PSSDDSGMSSFVENPQYFCGIFKDKDMCVQHIKRQDVVLKWELGEGAFGKVYLAECANLS
PDSDKMLVAIKTLKDANESTRQDFQREAELLTVLQHQNIVRFYGVCTDGEPLAMVFEYMR
HGDLNRFLRAHGPDAHILEEVKMPPLGQLTLPQMLHIAAQIASGMVYLASLHFVHRDLAT
RNCLVGDMGEGLMVKIGDFGMSRDIYSTDYYRVKVGGRTMLPIRWMPPESIMYRKFTTES
DIWSFGVVLWEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPKEVHGLMQGCWQREP
QQRLVIKDIHSRLLALVKSPPIYLDILG
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggttgtgggttctgctccatgggtagccccaatggctctggtactactggca
atcaccctggcagtaccagccctgggagggtgcccatccgcctgccggtgctccttcgcc
atgctgcagtgcctggagcccaatggcattgccactatacccgcgttggcactacaggag
agcgagaacgtcacggaaatttacatcgaaaatcaagccgacctggagaacattacagaa
gtagaccttgccaattatagagagttgaagaatctcacggtcacgttctgcaggctggcg
tacatctcggcgaatgctttccaacacaacctcaagctccaatatgtaaacctggcatct
aactccctggagcatatcagttggaaggtgttccattttcttcccctgctcaacctggtt
ttgagggacaacccccttgaatgctcctgtgatatccattggctgcagcaatggcagctt
aacgaccacagtgacctcgacaaccaaccgctacaatgcttctcaaatggccatgcccta
cagttagactccgtagagatggagaattgcactgtaccggatgtcgccattgtccatgcc
aacaccaaggtccaggagggaggcaacctgacatttgtgtgtcaggtgacaggagtgccc
gtgcctgtagtgaggtggcgcacgaataaactgctgtctcgctatactgtacaggagagg
ttctggggctctactttggagctggagttgcagctgtggaatatgtcctcagaagacaac
ctgcacaacttgacctgtgaggcagagaaccgggccgggcctggggaagagaaagtgacg
ttggacattgaatttccatccaaaatcatattcctgcacaacgctgagcaacagcaccac
tggtgtttcccctttaaggtggatggaaaccctgagccatccatccgctggcttttcaac
ggctccaacctgaccgagggcctctacacctacacacagttaattcccgactcggacgac
ggctctgtgaagcacggttgtctatttctcaacaagcccacccacctgaacaacggcctc
tacaccatcatcgtggggaacagactgggcgtggaccaggccacggccacggggatgttc
atggacaacccctttgacccctttgatcctgagggcatcatcccagtccttgaagaaagt
gatccacttcccaccaacaaatctaacgaggatgtcactgagaacacggagagcagagtg
tttggggtgtcagtggcagtgggtttggctgtgtttgcttgcgccttcctcctcatgatg
gtactggtcatcaacaagtgcggccagcagtccaagtttggtattcaccgttcatctgtc
ttgggaacagaggatgatcttgctgtgtcactgcgtttcatgaactttgggaccagccct
ccttcctctgacgactctggcatgtccagctttgtggagaacccccagtacttctgtggc
atcttcaaagacaaagacatgtgtgtgcaacacatcaaaagacaggatgtagttctgaag
tgggaattgggtgagggggcgtttggcaaagtctacctggcagagtgtgccaacctcagt
ccggacagtgacaaaatgctggtggccatcaagactctgaaggatgccaatgagtcgacc
cggcaggacttccagagagaggctgagctgctcacagtgctccagcaccagaacattgtt
cgcttctatggagtgtgtacagacggagagccactggcgatggtgtttgaatacatgaga
catggcgacctcaaccgcttcctcagggcgcacggtccagatgcccatatactggaggag
gtgaagatgcccccgttgggccagctcactcttccccagatgctgcacatcgccgcccag
atcgcttcgggcatggtctacctggcctcccttcacttcgtgcaccgagacctggccaca
cgcaactgcctggtgggagatatgggagagggtctgatggtcaagataggagactttggc
atgtcccgggacatctacagcacagactactacagggtaaaggtgggtgggcgtacgatg
cttcctattcgctggatgcctccggagagcatcatgtacaggaagttcaccacggagagt
gatatctggagctttggagtggtcctctgggaaatcttcacctatgggaaacagccctgg
taccagctctccaacagtgaggctatcgagtgcattacacagggccgggagctggagaga
ccacgcacttgccccaaagaggtgcacggcctgatgcagggctgctggcaaagggagccc
cagcagaggctggtcatcaaggacatccacagccgcctccttgcccttgtcaagagcccc
cctatctacctggacatcctggggtag
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